RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 RHAGQ02094 409 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 APOFQ13790 326 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 RFX4Q33E94 735 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 CYP27C1Q4G0S4 372 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 LIN52Q52LA3 116 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 MRPL14Q6P1L8 145 aaKnown RBP17.49■□□□□ 0.39
SMPD1-203ENST00000527275 DGAT2L6Q6ZPD8 337 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 TIPARPQ7Z3E1 657 aaKnown RBP17.49■□□□□ 0.39
SMPD1-203ENST00000527275 OR5D16Q8NGK9 328 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 GEMIN6Q8WXD5 167 aaKnown RBP17.49■□□□□ 0.39
SMPD1-203ENST00000527275 KAT2AQ92830 837 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 TSLPQ969D9 159 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 ZNF347Q96SE7 839 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 EPYCQ99645 322 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 AMBRA1Q9C0C7 1298 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 FAM192AQ9GZU8 254 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 SLC26A1Q9H2B4 701 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 IGKV3D-11A0A0A0MRZ8 115 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 PRAMEF25A6NGN4 478 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 VSTM2BA6NLU5 285 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 OR10H2O60403 315 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 ITGA2P17301 1181 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 RRM2P31350 389 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 MAGEA8P43361 318 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 RPL5P46777 297 aaKnown RBP17.49■□□□□ 0.39
SMPD1-203ENST00000527275 GABREP78334 506 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 KCNAB2Q13303 367 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 NSDHLQ15738 373 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 DUSP7Q16829 419 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 FOXB2Q5VYV0 432 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 CYP4Z1Q86W10 505 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 OR56A1Q8NGH5 318 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 ELP4Q96EB1 424 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 SLC46A1Q96NT5 459 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 POLR1BQ9H9Y6 1135 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 THSD1Q9NS62 852 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 P2RX2Q9UBL9 471 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 PADI1Q9ULC6 663 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 SH3GLB1Q9Y371 365 aa17.49■□□□□ 0.39
SMPD1-203ENST00000527275 EMC8O43402 210 aa17.48■□□□□ 0.39
SMPD1-203ENST00000527275 SLC28A2O43868 658 aa17.48■□□□□ 0.39
SMPD1-203ENST00000527275 PDE9AO76083 593 aa17.48■□□□□ 0.39
SMPD1-203ENST00000527275 DLGAP3O95886 979 aa17.48■□□□□ 0.39
SMPD1-203ENST00000527275 HMGN2P05204 90 aaKnown RBP17.48■□□□□ 0.39
SMPD1-203ENST00000527275 NT5EP21589 574 aa17.48■□□□□ 0.39
SMPD1-203ENST00000527275 IGFBP5P24593 272 aa17.48■□□□□ 0.39
SMPD1-203ENST00000527275 SOX18P35713 384 aa17.48■□□□□ 0.39
SMPD1-203ENST00000527275 MC3RP41968 323 aa17.48■□□□□ 0.39
SMPD1-203ENST00000527275 DAPP51397 102 aa17.48■□□□□ 0.39
SMPD1-203ENST00000527275 PRR5P85299 388 aa17.48■□□□□ 0.39
SMPD1-203ENST00000527275 SYPL1Q16563 259 aa17.48■□□□□ 0.39
SMPD1-203ENST00000527275 FAM198BQ6UWH4 519 aa17.48■□□□□ 0.39
SMPD1-203ENST00000527275 METTL25Q8N6Q8 603 aa17.48■□□□□ 0.39
SMPD1-203ENST00000527275 FKBP10Q96AY3 582 aa17.48■□□□□ 0.39
SMPD1-203ENST00000527275 ZNF300Q96RE9 604 aaPredicted RBP17.48■□□□□ 0.39
SMPD1-203ENST00000527275 SPSB2Q99619 263 aa17.48■□□□□ 0.39
SMPD1-203ENST00000527275 YIPF4Q9BSR8 244 aa17.48■□□□□ 0.39
SMPD1-203ENST00000527275 C3orf14Q9HBI5 128 aa17.48■□□□□ 0.39
SMPD1-203ENST00000527275 C14orf105Q9NVL8 296 aa17.48■□□□□ 0.39
SMPD1-203ENST00000527275 ZNF451Q9Y4E5 1061 aa17.48■□□□□ 0.39
SMPD1-203ENST00000527275 NUP210LQ5VU65 1888 aa17.48■□□□□ 0.39
SMPD1-203ENST00000527275 PRAMEF27A3QJZ7 478 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 IDSB3KWA1 339 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 ADAMDEC1O15204 470 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 MFN2O95140 757 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 KHKP50053 298 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 ANXA11P50995 505 aaKnown RBP17.47■□□□□ 0.39
SMPD1-203ENST00000527275 LASP1Q14847 261 aaKnown RBP17.47■□□□□ 0.39
SMPD1-203ENST00000527275 FAM69BQ5VUD6 431 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 C6orf15Q6UXA7 325 aaPredicted RBP17.47■□□□□ 0.39
SMPD1-203ENST00000527275 SIMC1Q8NDZ2 872 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 NUP43Q8NFH3 380 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 OR7G2Q8NG99 324 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 TESMINQ9Y4I5 508 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 MITFO75030 526 aaPredicted RBP17.47■□□□□ 0.39
SMPD1-203ENST00000527275 IFNA16P05015 189 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 CCNYL3P0C7X3 344 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 NR2F1P10589 423 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 PIGAP37287 484 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 YAP1P46937 504 aaKnown RBP17.47■□□□□ 0.39
SMPD1-203ENST00000527275 SERTAD2Q14140 314 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 PRICKLE4Q2TBC4 344 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 KCTD21Q4G0X4 260 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 TRMT12Q53H54 448 aaKnown RBP17.47■□□□□ 0.39
SMPD1-203ENST00000527275 ZNF628Q5EBL2 1059 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 KDM4DQ6B0I6 523 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 FAM111BQ6SJ93 734 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 C16orf58Q96GQ5 468 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 DGAT2Q96PD7 388 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 ZNF607Q96SK3 696 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 SPTBN4Q9H254 2564 aa17.47■□□□□ 0.39
SMPD1-203ENST00000527275 LOC100130705A0A1B0GUX0 176 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 C9J4A7 227 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 TNFRSF11BO00300 401 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 CT62P0C5K7 136 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 SDHBP21912 280 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 SLC5A2P31639 672 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 STT3AP46977 705 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 NCF4Q15080 339 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 FAAH2Q6GMR7 532 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms