RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 RSPO3Q9BXY4 272 aaPredicted RBP6.18□□□□□ -1.42
NEDD8-203ENST00000524927 XPO4Q9C0E2 1151 aaKnown RBP6.18□□□□□ -1.42
NEDD8-203ENST00000524927 EXO5Q9H790 373 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 SYNCQ9H7C4 482 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 DEPPQ9NTK1 212 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 C20orf141Q9NUB4 165 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 KIAA1456Q9P272 454 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 HSPB7Q9UBY9 170 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 PINLYPA6NC86 204 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 MGAT4DA6NG13 374 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 CD8B2A6NJW9 211 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 C3orf84H3BNL1 204 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 M0QZ24 198 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 SLC25A17O43808 307 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 SRPX2O60687 465 aaPredicted RBP6.17□□□□□ -1.42
NEDD8-203ENST00000524927 SCGB1D1O95968 90 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 ARHGAP25P42331 645 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 MAGEA5P43359 124 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 DIO3P55073 304 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 RPL7AP62424 266 aaKnown RBP6.17□□□□□ -1.42
NEDD8-203ENST00000524927 EEF1A1P68104 462 aaKnown RBP6.17□□□□□ -1.42
NEDD8-203ENST00000524927 ZNF91Q05481 1191 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 PRKG2Q13237 762 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 PDK1Q15118 436 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 CCDC14Q49A88 953 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 SYTL3Q4VX76 610 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 ENTPD8Q5MY95 495 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 SERTAD4-AS1Q5TG53 156 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 EEF1A1P5Q5VTE0 462 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 ZNF793Q6ZN11 406 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 ARCQ7LC44 396 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 SLC46A3Q7Z3Q1 461 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 PXKQ7Z7A4 578 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 DDIASQ8IXT1 998 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 FAM185AQ8N0U4 392 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 PDILTQ8N807 584 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 OR2M7Q8NG81 312 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 ELP5Q8TE02 316 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 RBM41Q96IZ5 413 aaKnown RBP6.17□□□□□ -1.42
NEDD8-203ENST00000524927 BTBD9Q96Q07 612 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 CYTH2Q99418 400 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 CCM2Q9BSQ5 444 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 CNPY3Q9BT09 278 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 SLC39A8Q9C0K1 460 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 BLZF1Q9H2G9 400 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 METTL17Q9H7H0 456 aaPredicted RBP6.17□□□□□ -1.42
NEDD8-203ENST00000524927 BRF2Q9HAW0 419 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 IL1RL2Q9HB29 575 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 CTNNAL1Q9UBT7 734 aa6.17□□□□□ -1.42
NEDD8-203ENST00000524927 MAGED1Q9Y5V3 778 aaPredicted RBP6.17□□□□□ -1.42
NEDD8-203ENST00000524927 LCE6AA0A183 80 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 ATP6AP2A0A1C7CYW4 349 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 TTC36A6NLP5 189 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 AP3D1O14617 1153 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 TP73O15350 636 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 ATP6AP2O75787 350 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 SEC14L2O76054 403 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 PCMT1P22061 227 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 ATP5F1P24539 256 aaPredicted RBP6.16□□□□□ -1.42
NEDD8-203ENST00000524927 DPP4P27487 766 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 SHMT2P34897 504 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 RFC1P35251 1148 aaPredicted RBP6.16□□□□□ -1.42
NEDD8-203ENST00000524927 CPOXP36551 454 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 SLC26A3P40879 764 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 RPL26P61254 145 aaKnown RBP6.16□□□□□ -1.42
NEDD8-203ENST00000524927 GCNT1Q02742 428 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 FAM27E3Q08E93 113 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 STK4Q13043 487 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 GSTA3Q16772 222 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 PTPN20Q4JDL3 420 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 FNBP1LQ5T0N5 605 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 ALS2CLQ60I27 953 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 KCTD11Q693B1 232 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 CDC73Q6P1J9 531 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 CCBE1Q6UXH8 406 aaPredicted RBP6.16□□□□□ -1.42
NEDD8-203ENST00000524927 LANCL3Q6ZV70 420 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 PGBD5Q8N414 524 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 RASGEF1AQ8N9B8 481 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 GPR26Q8NDV2 337 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 C10orf105Q8TEF2 133 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 SMAP2Q8WU79 429 aaPredicted RBP6.16□□□□□ -1.42
NEDD8-203ENST00000524927 DPF1Q92782 380 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 SMARCE1Q969G3 411 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 C11orf24Q96F05 449 aaPredicted RBP6.16□□□□□ -1.42
NEDD8-203ENST00000524927 ZFP3Q96NJ6 502 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 LPAR4Q99677 370 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 NRTNQ99748 197 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 SELENOSQ9BQE4 189 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 QTRT1Q9BXR0 403 aaKnown RBP6.16□□□□□ -1.42
NEDD8-203ENST00000524927 XKR8Q9H6D3 395 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 MVB12BQ9H7P6 319 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 UGT1A8Q9HAW9 530 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 LIMA1Q9UHB6 759 aaKnown RBP6.16□□□□□ -1.42
NEDD8-203ENST00000524927 RPL26L1Q9UNX3 145 aaKnown RBP6.16□□□□□ -1.42
NEDD8-203ENST00000524927 RAP2CQ9Y3L5 183 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 WIF1Q9Y5W5 379 aa6.16□□□□□ -1.42
NEDD8-203ENST00000524927 FRG2CA6NGY1 282 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 LRRC53A6NM62 1247 aa6.15□□□□□ -1.42
NEDD8-203ENST00000524927 PES1O00541 588 aaKnown RBP6.15□□□□□ -1.42
NEDD8-203ENST00000524927 LDLRAD4O15165 306 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms