RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 TEAD1P28347 426 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 MPIP34949 423 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 RPS5P46782 204 aaKnown RBP10.38□□□□□ -0.75
HDAC9-228ENST00000524023 ARFIP1P53367 373 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 RAB8AP61006 207 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 ABATP80404 500 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 DAB2P98082 770 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 CEBPEQ15744 281 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 CST6Q15828 149 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 NDUFA5Q16718 116 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 PDZK1Q5T2W1 519 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 TYW3Q6IPR3 259 aaKnown RBP10.38□□□□□ -0.75
HDAC9-228ENST00000524023 CD200R1LQ6Q8B3 271 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 RRM2BQ7LG56 351 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 LHFPL3Q86UP9 236 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 OR2L3Q8NG85 312 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 OR9A2Q8NGT5 310 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 OR52P1PQ8NH57 321 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 PIGXQ8TBF5 258 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 ZNF681Q96N22 645 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 PHOX2BQ99453 314 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 SARGQ9BW04 601 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 PRRG3Q9BZD7 231 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 BTBD1Q9H0C5 482 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 MMP28Q9H239 520 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 ANKRD19PQ9H560 264 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 MARCH7Q9H992 704 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 CALML5Q9NZT1 146 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 APOBEC3BQ9UH17 382 aaKnown RBP10.38□□□□□ -0.75
HDAC9-228ENST00000524023 SNX7Q9UNH6 387 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 ZFR2Q9UPR6 939 aaKnown RBP10.38□□□□□ -0.75
HDAC9-228ENST00000524023 LIPT1Q9Y234 373 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 GSTK1Q9Y2Q3 226 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 C2orf16Q68DN1 1984 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 TRANK1O15050 2925 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 LINC01553A4QN01 128 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 TFECO14948 347 aaPredicted RBP10.38□□□□□ -0.75
HDAC9-228ENST00000524023 ZIC2O95409 532 aaPredicted RBP10.38□□□□□ -0.75
HDAC9-228ENST00000524023 LALBAP00709 142 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 CCNYL3P0C7X3 344 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 GNSP15586 552 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 TCEA1P23193 301 aaKnown RBP10.38□□□□□ -0.75
HDAC9-228ENST00000524023 PEBP1P30086 187 aaKnown RBP10.38□□□□□ -0.75
HDAC9-228ENST00000524023 SOX18P35713 384 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 DDOSTP39656 456 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 WASP42768 502 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 SLC1A3P43003 542 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 AVPR1BP47901 424 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 CDH11P55287 796 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 HOXC5Q00444 222 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 ZNF628Q5EBL2 1059 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 PPP2R2DQ66LE6 453 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 SLC30A6Q6NXT4 461 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 UTS2BQ765I0 119 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 GATAD2AQ86YP4 633 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 NKAIN4Q8IVV8 208 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 CAMKK1Q8N5S9 505 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 ZFP41Q8N8Y5 198 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 POGLUT1Q8NBL1 392 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 TMEM145Q8NBT3 493 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 SRFBP1Q8NEF9 429 aaKnown RBP10.38□□□□□ -0.75
HDAC9-228ENST00000524023 OR4Q3Q8NH05 313 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 AP3S1Q92572 193 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 KIAA1143Q96AT1 154 aaPredicted RBP10.38□□□□□ -0.75
HDAC9-228ENST00000524023 GIMAP5Q96F15 307 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 SNX18Q96RF0 628 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 C11orf54Q9H0W9 315 aaPredicted RBP10.38□□□□□ -0.75
HDAC9-228ENST00000524023 DDX28Q9NUL7 540 aaKnown RBP10.38□□□□□ -0.75
HDAC9-228ENST00000524023 GIMAP4Q9NUV9 329 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 SPHK1Q9NYA1 384 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 SCN3AQ9NY46 2000 aa10.38□□□□□ -0.75
HDAC9-228ENST00000524023 TRDV1A0A1B0GX56 115 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 A0A1W2PP55 124 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 HMX3A6NHT5 357 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 PRR19A6NJB7 356 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 FAM47E-STBD1D6RA91 191 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 SURF4O15260 269 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 CH25HO95992 272 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 CEACAM5P06731 702 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 S100A1P23297 94 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 FPR3P25089 353 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 PRKAR1BP31321 381 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 IFNA8P32881 189 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 STAT5AP42229 794 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 TSFMP43897 325 aaKnown RBP10.37□□□□□ -0.75
HDAC9-228ENST00000524023 CAV3P56539 151 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 LRRC32Q14392 662 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 DECR1Q16698 335 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 PYDC2Q56P42 97 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 SLC35F1Q5T1Q4 408 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 AADACL4Q5VUY2 407 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 PRR23CQ6ZRP0 262 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 C16orf62Q7Z3J2 963 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 RDH10Q8IZV5 341 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 HDDC3Q8N4P3 179 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 MFSD9Q8NBP5 474 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 OR4F15Q8NGB8 312 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 ACOT11Q8WXI4 607 aaPredicted RBP10.37□□□□□ -0.75
HDAC9-228ENST00000524023 KAT2AQ92830 837 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms