RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 ALG8Q9BVK2 526 aa8.52□□□□□ -1.05
CSMD1-212ENST00000523387 OR2AG1Q9H205 316 aa8.52□□□□□ -1.05
CSMD1-212ENST00000523387 MYNNQ9NPC7 610 aa8.52□□□□□ -1.05
CSMD1-212ENST00000523387 hCG_1807616A0A1W2PRN6 198 aa8.52□□□□□ -1.05
CSMD1-212ENST00000523387 SGK494L7N484 410 aa8.52□□□□□ -1.05
CSMD1-212ENST00000523387 FZD7O75084 574 aa8.52□□□□□ -1.05
CSMD1-212ENST00000523387 PTBP1P26599 531 aaKnown RBP eCLIP8.52□□□□□ -1.05
CSMD1-212ENST00000523387 VIPR1P32241 457 aa8.52□□□□□ -1.05
CSMD1-212ENST00000523387 SOX9P48436 509 aa8.52□□□□□ -1.05
CSMD1-212ENST00000523387 SLC11A1P49279 550 aa8.52□□□□□ -1.05
CSMD1-212ENST00000523387 CCDC157Q569K6 752 aa8.52□□□□□ -1.05
CSMD1-212ENST00000523387 NUDT13Q86X67 352 aa8.52□□□□□ -1.05
CSMD1-212ENST00000523387 ZNF527Q8NB42 609 aa8.52□□□□□ -1.05
CSMD1-212ENST00000523387 WDR20Q8TBZ3 569 aa8.52□□□□□ -1.05
CSMD1-212ENST00000523387 MRPL48Q96GC5 212 aaKnown RBP8.52□□□□□ -1.05
CSMD1-212ENST00000523387 PDCD10Q9BUL8 212 aa8.52□□□□□ -1.05
CSMD1-212ENST00000523387 TAS2R10Q9NYW0 307 aa8.52□□□□□ -1.05
CSMD1-212ENST00000523387 FKBP7Q9Y680 259 aa8.52□□□□□ -1.05
CSMD1-212ENST00000523387 ARPC1BO15143 372 aaKnown RBP8.51□□□□□ -1.05
CSMD1-212ENST00000523387 ARL6IP5O75915 188 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 F11P03951 625 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 CD22P20273 847 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 GABRR2P28476 465 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 RBMS1P29558 406 aaKnown RBP8.51□□□□□ -1.05
CSMD1-212ENST00000523387 FAUP35544 74 aaKnown RBP8.51□□□□□ -1.05
CSMD1-212ENST00000523387 GATMP50440 423 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 TPMTP51580 245 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 KIAA1024LP59773 190 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 LMAN2Q12907 356 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 AKIRIN2Q53H80 203 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 TCTE1Q5JU00 501 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 PDZD9Q8IXQ8 264 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 CMTM8Q8IZV2 173 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 MMP21Q8N119 569 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 OR5M3Q8NGP4 307 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 C2orf15Q8WU43 125 aaKnown RBP8.51□□□□□ -1.05
CSMD1-212ENST00000523387 ADAMTS14Q8WXS8 1223 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 MCHR1Q99705 422 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 SLC25A19Q9HC21 320 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 MRPL17Q9NRX2 175 aaKnown RBP8.51□□□□□ -1.05
CSMD1-212ENST00000523387 SDHAF2Q9NX18 166 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 COMMD9Q9P000 198 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 TAC3Q9UHF0 121 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 GTF2A1LQ9UNN4 478 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 PDCD5O14737 125 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 CREBL2O60519 120 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-212ENST00000523387 FMO6PO60774 539 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 S100A9P06702 114 aaKnown RBP8.51□□□□□ -1.05
CSMD1-212ENST00000523387 C8orf89P0DMQ9 161 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 C12orf73Q69YU5 71 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 GDPD4Q6W3E5 623 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 ZER1Q7Z7L7 766 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 FAM98AQ8NCA5 519 aaKnown RBP8.51□□□□□ -1.05
CSMD1-212ENST00000523387 OR9A1PQ8NGU1 263 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 OR56B4Q8NH76 319 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 ING5Q8WYH8 240 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 SFXN2Q96NB2 322 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 C1QTNF7Q9BXJ2 289 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 MBD2Q9UBB5 411 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 PRKAG2Q9UGJ0 569 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 LTBP3Q9NS15 1303 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 LINC00862A6NCI5 91 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 SLC9B1P1A6NJY1 282 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 NEDD8-MDP1E9PL57 170 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 PRAMEF4O60810 478 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 TPPPO94811 219 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 SOD1P00441 154 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 AHCYP23526 432 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 IMPA1P29218 277 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 HMGA2P52926 109 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 PSMD4P55036 377 aaKnown RBP8.51□□□□□ -1.05
CSMD1-212ENST00000523387 PRR5P85299 388 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 TMEM115Q12893 351 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-212ENST00000523387 CLLU1OSQ5K130 101 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 CLLU1Q5K131 121 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 NDUFAF5Q5TEU4 345 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 PRAMEF9Q5VWM5 478 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 MTSS1LQ765P7 747 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 NRMQ8IXM6 262 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 CCDC36Q8IYA8 594 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 LILRA3Q8N6C8 439 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-212ENST00000523387 PCSK9Q8NBP7 692 aaKnown RBP8.51□□□□□ -1.05
CSMD1-212ENST00000523387 ZNF740Q8NDX6 193 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 OR4C6Q8NH72 309 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 SOCS4Q8WXH5 440 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 TMEM175Q9BSA9 504 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 PRR14Q9BWN1 585 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 BABAM2Q9NXR7 383 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 ACSL5Q9ULC5 683 aa8.51□□□□□ -1.05
CSMD1-212ENST00000523387 ARRDC5A6NEK1 342 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 SERPINA3P01011 423 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 LRG1P02750 347 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 SNRPBP14678 240 aaKnown RBP8.5□□□□□ -1.05
CSMD1-212ENST00000523387 AHRP35869 848 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 KCNJ5P48544 419 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 PXNP49023 591 aaPredicted RBP8.5□□□□□ -1.05
CSMD1-212ENST00000523387 GBX2P52951 348 aaPredicted RBP8.5□□□□□ -1.05
CSMD1-212ENST00000523387 PUDPQ08623 228 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 SFXN4Q6P4A7 337 aa8.5□□□□□ -1.05
CSMD1-212ENST00000523387 NXPE4Q6UWF7 544 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms