RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 DLGAP1O14490 977 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 PRKNO60260 465 aaPredicted RBP14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 CPNE3O75131 537 aaKnown RBP14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 NPIPA8P0DM63 369 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 CCKBRP32239 447 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 RORAP35398 523 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 HSPA13P48723 471 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 GTF2A1P52655 376 aaPredicted RBP14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 SPIBQ01892 262 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 KCNC4Q03721 635 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 GANABQ14697 944 aaKnown RBP14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 CSRP2Q16527 193 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 SHQ1Q6PI26 577 aaKnown RBP14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 NPSR1Q6W5P4 371 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 BPHLQ86WA6 291 aaPredicted RBP14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 CHDHQ8NE62 594 aaPredicted RBP14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 OR52P1PQ8NH57 321 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 ZNF578Q96N58 590 aaPredicted RBP14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 ITPAQ9BY32 194 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 TGIF2Q9GZN2 237 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 ZNF350Q9GZX5 532 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 AKIRIN1Q9H9L7 192 aaPredicted RBP14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 SLC39A1Q9NY26 324 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 RHCGQ9UBD6 479 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 RAB26Q9ULW5 256 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 ENPP4Q9Y6X5 453 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 CCDC88CQ9P219 2028 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 IGLV3-12A0A075B6K2 115 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 MEN1O00255 615 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 RFPL3O75679 317 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 ITGA2P17301 1181 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 FUT4P22083 530 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 RNF144AP50876 292 aaPredicted RBP14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 ALDH3A2P51648 485 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 CDH12P55289 794 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 INSM1Q01101 510 aaPredicted RBP14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 ELAVL1Q15717 326 aaKnown RBP14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 DEF8Q6ZN54 512 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 OR52J3Q8NH60 311 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 HOXB13Q92826 284 aaPredicted RBP14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 ZNF347Q96SE7 839 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 CMKLR1Q99788 373 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 MESP1Q9BRJ9 268 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 LRFN3Q9BTN0 628 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 PINK1Q9BXM7 581 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 C8orf4Q9NR00 106 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 SATB2Q9UPW6 733 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 FAM32AQ9Y421 112 aaKnown RBP14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 DYRK3O43781 588 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 STX11O75558 287 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 KCNK2O95069 426 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 HEXBP07686 556 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 FPR1P21462 350 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 DNAJA1P31689 397 aaKnown RBP14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 OVCH1Q7RTY7 1134 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 ZAR1Q86SH2 424 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 HIPK1Q86Z02 1210 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 AMER2Q8N7J2 671 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 SLC2A12Q8TD20 617 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 FBXL20Q96IG2 436 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 CNBD2Q96M20 576 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 PIP5K1AQ99755 562 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 MTHFD2LQ9H903 347 aaPredicted RBP14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 FBXO8Q9NRD0 319 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 SMPD3Q9NY59 655 aaPredicted RBP14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 PDP1Q9P0J1 537 aaPredicted RBP14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 AKAP7Q9P0M2 348 aaPredicted RBP14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 LOXL2Q9Y4K0 774 aa14.34□□□□□ -0.11
CTNNA1-236ENST00000522792 IGHV3-20A0A0C4DH32 117 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 PMS2P1A4D2B8 440 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 CLDN24A6NM45 220 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 EIF4E1BA6NMX2 242 aaKnown RBP14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 IDSB3KWA1 339 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 TNFRSF11BO00300 401 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 ADAMDEC1O15204 470 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 FRS3O43559 492 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 HS6ST1O60243 411 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 CNOT3O75175 753 aaKnown RBP14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 DNAJB5O75953 348 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 SNAP29O95721 258 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 DDAH2O95865 285 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 LGI1O95970 557 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 ALPLP05186 524 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 ETV5P41161 510 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 ARHGDIAP52565 204 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 MED21Q13503 144 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 ZIK1Q3SY52 487 aaPredicted RBP14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 NHSL2Q5HYW2 709 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 FAM199XQ6PEV8 388 aaPredicted RBP14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 PEX5LQ8IYB4 626 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 ZNF619Q8N2I2 560 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 CDC6Q99741 560 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 OSBPL11Q9BXB4 747 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 OSBPL10Q9BXB5 764 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 ULBP3Q9BZM4 244 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 Q9H521 79 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 C14orf105Q9NVL8 296 aa14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 ZNF443Q9Y2A4 671 aaPredicted RBP14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 GPR55Q9Y2T6 319 aaPredicted RBP14.33□□□□□ -0.12
CTNNA1-236ENST00000522792 CHST2Q9Y4C5 530 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms