RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 ADAM18Q9Y3Q7 739 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 C17orf113A0A1B0GUU1 675 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 SNAP29O95721 258 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 GNRHRP30968 328 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 CSNK1EP49674 416 aaKnown RBP15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 LEG1Q6P5S2 330 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 SPAG16Q8N0X2 631 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 OR9A2Q8NGT5 310 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 PPP1R35Q8TAP8 253 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 CREB3L1Q96BA8 519 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 CCDC120Q96HB5 630 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 LRR1Q96L50 414 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 C5AR2Q9P296 337 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 MAP1BP46821 2468 aaKnown RBP15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 SLC35F4A4IF30 521 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 ZBTB42B2RXF5 422 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 M0R129 80 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 SULT2B1O00204 365 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 BPNT1O95861 308 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 GCH1P30793 250 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 GPR149Q86SP6 731 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 NRMQ8IXM6 262 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 MS4A15Q8N5U1 240 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 ZNF709Q8N972 641 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 TCEAL3Q969E4 200 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 ATXN7L1Q9ULK2 861 aaPredicted RBP15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 DIRAS3O95661 229 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 EDN1P05305 212 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 HTR3AP46098 478 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 DAP3P51398 398 aaKnown RBP15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 DCAF7P61962 342 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 TAP2Q03519 686 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 NPRL3Q12980 569 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 CCSAPQ6IQ19 270 aaPredicted RBP15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 CEACAM19Q7Z692 300 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 SLC22A16Q86VW1 577 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 SLC39A13Q96H72 371 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 ZIC5Q96T25 663 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 ZNF442Q9H7R0 627 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 PAK1IP1Q9NWT1 392 aaPredicted RBP15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 CCDC88AQ3V6T2 1871 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 F11P03951 625 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 VASPP50552 380 aaPredicted RBP15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 FXYD6P3P58550 94 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 ARL6IP1Q15041 203 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 LETMD1Q6P1Q0 360 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 ALKAL1Q6UXT8 129 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 TMPRSS12Q86WS5 348 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 OR4K13Q8NH42 304 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 NECAB3Q96P71 396 aaPredicted RBP15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 ZNF700Q9H0M5 742 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 MYNNQ9NPC7 610 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 KCMF1Q9P0J7 381 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 BOKQ9UMX3 212 aaPredicted RBP15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 HSPE1-MOB4S4R3N1 261 aa15.37■□□□□ 0.05
PCDHA3-201ENST00000522353 C13orf42A0A1B0GVH6 325 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 H3BML4 177 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 RFXAPO00287 272 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 RNASET2O00584 256 aaKnown RBP15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 RBBP9O75884 186 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 SIX1Q15475 284 aaPredicted RBP15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 TRIM61Q5EBN2 209 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 OR13C3Q8NGS6 347 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 FCAMRQ8WWV6 532 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 ICKQ9UPZ9 632 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 RPH3AQ9Y2J0 694 aaPredicted RBP15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 A0A1W2PPW3 197 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 CENPBD1B2RD01 187 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 CLIC3O95833 236 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 ITGBL1O95965 494 aaPredicted RBP15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 GDF1P27539 372 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 FASLGP48023 281 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 DNASE1L3Q13609 305 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 RGNQ15493 299 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 ATAD3CQ5T2N8 411 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 LHFPL3Q86UP9 236 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 GALNT6Q8NCL4 622 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 LRRC20Q8TCA0 184 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 TBC1D20Q96BZ9 403 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 DNTTIP1Q9H147 329 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 PRSS16Q9NQE7 514 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 CUTCQ9NTM9 273 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 LOC102723532A0A0G2JNH3 316 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 CACNG3O60359 315 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 VNN2O95498 520 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 AHRP35869 848 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 BCL2L15Q5TBC7 163 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 BAIAP2L2Q6UXY1 529 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 RAB9BQ9NP90 201 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 PARPBPQ9NWS1 579 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 EFCAB7A8K855 629 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 SOCS7O14512 581 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 CASC3O15234 703 aaKnown RBP15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 POU3F2P20265 443 aaPredicted RBP15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 APLNRP35414 380 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 PRDX1Q06830 199 aaKnown RBP15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 RPE65Q16518 533 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 ZNF789Q5FWF6 425 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 SHISA6Q6ZSJ9 500 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 VASH1Q7L8A9 365 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms