RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 IDH3BO43837 385 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 EDIL3O43854 480 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 TYROBPO43914 113 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 DUSP11O75319 330 aaKnown RBP2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 IDH1O75874 414 aaKnown RBP2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 IGF1P05019 195 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 WNT2P09544 360 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 EPB41P11171 864 aaKnown RBP2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 TPSB2P20231 275 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 GLRA2P23416 452 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 IGFBP5P24593 272 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 DLSTP36957 453 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 HTR5AP47898 357 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 GBX2P52951 348 aaPredicted RBP2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 NDUFV3P56181 108 aaKnown RBP2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 DPYSL3Q14195 570 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 TPSAB1Q15661 275 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 USH1GQ495M9 461 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 CEP55Q53EZ4 464 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 FAM120AOSQ5T036 256 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 SEL1L2Q5TEA6 688 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 PNCKQ6P2M8 343 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 CCBE1Q6UXH8 406 aaPredicted RBP2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 ZNF841Q6ZN19 808 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 PRSS48Q7RTY5 328 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 EFCAB13Q8IY85 973 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 ZCCHC7Q8N3Z6 543 aaKnown RBP2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 THRSPQ92748 146 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 ART4Q93070 314 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 LHX4Q969G2 390 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 ART5Q96L15 291 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 VPS35Q96QK1 796 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 LGMNQ99538 433 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 HSD17B14Q9BPX1 270 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 APOOQ9BUR5 198 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 DGCR6LQ9BY27 220 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 LIME1Q9H400 295 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 TSPY26PQ9H489 355 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 RPAP3Q9H6T3 665 aaPredicted RBP2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 KCNK13Q9HB14 408 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 MEPEQ9NQ76 525 aaPredicted RBP2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 GDAP2Q9NXN4 497 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 AATFQ9NY61 560 aaKnown RBP eCLIP2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 CTSZQ9UBR2 303 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 GHRLQ9UBU3 117 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 RARRES3Q9UL19 164 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 FBXO7Q9Y3I1 522 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 ASB3Q9Y575 518 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 BCORL1Q5H9F3 1711 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 PREX2Q70Z35 1606 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 RNF17Q9BXT8 1623 aaKnown RBP2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 KDM5CP41229 1560 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 PCNX3Q9H6A9 2034 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 MBD5Q9P267 1494 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 PTCH1Q13635 1447 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 CDC42BPBQ9Y5S2 1711 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 IGHV3OR16-10A0A075B7F0 116 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 RPL37AP8A6NKH3 93 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 PPIAL4DF5H284 164 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 TFECO14948 347 aaPredicted RBP2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 RIPK2O43353 540 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 OR1F1O43749 312 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 MFN2O95140 757 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 MT-ND1P03886 318 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 OR9G9P0C7N8 305 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 TNNI3P19429 210 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 UGT1A4P22310 534 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 DHPSP49366 369 aaPredicted RBP2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 ATP4BP51164 291 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 PEX3P56589 373 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 SRPXP78539 464 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 SPIBQ01892 262 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 SELPLGQ14242 412 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 FASTKD3Q14CZ7 662 aaKnown RBP2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 EMC2Q15006 297 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 CAMK4Q16566 473 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 CCDC152Q4G0S7 254 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 MUC21Q5SSG8 566 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 ZC2HC1BQ5TFG8 222 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 CENPPQ6IPU0 288 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 BTNL3Q6UXE8 466 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 Q7L0L9 218 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 ZNF329Q86UD4 541 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 FAM3CQ92520 227 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 RPL3LQ92901 407 aaKnown RBP2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 PSKH2Q96QS6 385 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 SYT11Q9BT88 431 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 TMEM121Q9BTD3 319 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 TBCDQ9BTW9 1192 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 TBC1D10AQ9BXI6 508 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 OCR1Q9BZK8 76 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 SLC25A51Q9H1U9 297 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 ADGRL4Q9HBW9 690 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 SCRT2Q9NQ03 307 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 CHMP2BQ9UQN3 213 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 GSTK1Q9Y2Q3 226 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 EXOSC1Q9Y3B2 195 aaKnown RBP2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 KIF3AQ9Y496 699 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 AP4B1Q9Y6B7 739 aa2.77□□□□□ -1.97
HMGN1P28-201ENST00000521340 LAMC1P11047 1609 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms