RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 K7EQM0 130 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 K7ERI5 159 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 DCXO43602 365 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 RAMP1O60894 148 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 KIAA0754O94854 1291 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 HCKP08631 526 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 HSD17B1P14061 328 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 LMO2P25791 158 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 CHI3L1P36222 383 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 CAPGP40121 348 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 KLHL22Q53GT1 634 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 VWA2Q5GFL6 755 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 REP15Q6BDI9 236 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 BTNL3Q6UXE8 466 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 APOOLQ6UXV4 268 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 ADAMTSL5Q6ZMM2 481 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 CEACAM19Q7Z692 300 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 ANKRD37Q7Z713 158 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 CATSPER3Q86XQ3 398 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 ZNF491Q8N8L2 437 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 RAET1EQ8TD07 263 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 SPRYD4Q8WW59 207 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 OSTF1Q92882 214 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 ART4Q93070 314 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 MOCOSQ96EN8 888 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 LINC00479Q96M42 142 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 ZNF607Q96SK3 696 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 TTYH2Q9BSA4 534 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 TRIM9Q9C026 710 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 COMMD4Q9H0A8 199 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 GPN2Q9H9Y4 310 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 ESM1Q9NQ30 184 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 ABCC13Q9NSE7 274 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 C6orf203Q9P0P8 240 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 CTSZQ9UBR2 303 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 CHRNA9Q9UGM1 479 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 MLXQ9UH92 298 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 OR10H1Q9Y4A9 318 aa4.33□□□□□ -1.72
HMGB1P46-201ENST00000520062 TRBV7-9A0A0J9YWB2 115 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 PRR23D1E9PI22 279 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 RIPK2O43353 540 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 TYROBPO43914 113 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 ZG16O60844 167 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 OPN1LWP04000 364 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 PRR23D2P0DMB1 279 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 CA8P35219 290 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 PRELPP51888 382 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 MFAP2P55001 183 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 IRX1P78414 480 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 NUCB2P80303 420 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 CSTF1Q05048 431 aaKnown RBP4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 ELAVL2Q12926 359 aaKnown RBP4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 PCK2Q16822 640 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 CEP55Q53EZ4 464 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 ZC2HC1BQ5TFG8 222 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 ADAM5Q6NVV9 412 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 ZNF329Q86UD4 541 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 ARL14Q8N4G2 192 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 OR2T3Q8NH03 318 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 TTC25Q96NG3 672 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 CHCHD5Q9BSY4 110 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 SLC25A51Q9H1U9 297 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 DHX33Q9H6R0 707 aaKnown RBP4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 GORASP2Q9H8Y8 452 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 COX16Q9P0S2 106 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 CYTH4Q9UIA0 394 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 ZNF346Q9UL40 294 aaKnown RBP4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 MYH15Q9Y2K3 1946 aa4.32□□□□□ -1.72
HMGB1P46-201ENST00000520062 IGHV3OR16-10A0A075B7F0 116 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 C15orf38-AP3S2A0A0A6YYH1 394 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 FOXI3A8MTJ6 420 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 A8MXK9 166 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 EPM2AB3EWF7 344 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 C11orf98E9PRG8 122 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 DUX1O43812 170 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 BCAS1O75363 584 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 PALMO75781 387 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 ADCY5O95622 1261 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 POP4O95707 220 aaKnown RBP4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 MT-ND1P03886 318 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 ANXA3P12429 323 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 BCKDHAP12694 445 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 ZNF10P21506 573 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 PPT1P50897 306 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 ATP4BP51164 291 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 CBX1P83916 185 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 CNTN2Q02246 1040 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 ACY1Q03154 408 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 IL24Q13007 206 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 SELPLGQ14242 412 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 RAB35Q15286 201 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 CCDC152Q4G0S7 254 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 ACER2Q5QJU3 275 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 RABGAP1LQ5R372 815 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 CENPPQ6IPU0 288 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 ARMCX5Q6P1M9 558 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 PNCKQ6P2M8 343 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 BLOC1S2Q6QNY1 142 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 ZNF841Q6ZN19 808 aa4.31□□□□□ -1.72
HMGB1P46-201ENST00000520062 TMUB2Q71RG4 321 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms