RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 TM2D1Q9BX74 207 aa4.39□□□□□ -1.71
PTPN12-213ENST00000519553 KRTAP4-4Q9BYR3 166 aa4.39□□□□□ -1.71
PTPN12-213ENST00000519553 MOSPD1Q9UJG1 213 aa4.39□□□□□ -1.71
PTPN12-213ENST00000519553 PLA2G4CQ9UP65 541 aa4.39□□□□□ -1.71
PTPN12-213ENST00000519553 NUDCQ9Y266 331 aa4.39□□□□□ -1.71
PTPN12-213ENST00000519553 IGKV6D-41A0A0C4DH26 115 aa4.38□□□□□ -1.71
PTPN12-213ENST00000519553 NUDT21O43809 227 aaKnown RBP4.38□□□□□ -1.71
PTPN12-213ENST00000519553 LY6G6DO95868 133 aa4.38□□□□□ -1.71
PTPN12-213ENST00000519553 SLC35G4P0C7Q5 338 aa4.38□□□□□ -1.71
PTPN12-213ENST00000519553 P0C879 139 aa4.38□□□□□ -1.71
PTPN12-213ENST00000519553 PTPN6P29350 595 aa4.38□□□□□ -1.71
PTPN12-213ENST00000519553 HSPA1LP34931 641 aa4.38□□□□□ -1.71
PTPN12-213ENST00000519553 HERVK_113P63132 956 aa4.38□□□□□ -1.71
PTPN12-213ENST00000519553 ERVK-8P63133 956 aa4.38□□□□□ -1.71
PTPN12-213ENST00000519553 MRPS6P82932 125 aaKnown RBP4.38□□□□□ -1.71
PTPN12-213ENST00000519553 ASAH1Q13510 395 aa4.38□□□□□ -1.71
PTPN12-213ENST00000519553 SNX1Q13596 522 aa4.38□□□□□ -1.71
PTPN12-213ENST00000519553 DMKNQ6E0U4 476 aaPredicted RBP4.38□□□□□ -1.71
PTPN12-213ENST00000519553 RAB12Q6IQ22 244 aa4.38□□□□□ -1.71
PTPN12-213ENST00000519553 TMEM26Q6ZUK4 368 aa4.38□□□□□ -1.71
PTPN12-213ENST00000519553 ELMOD2Q8IZ81 293 aa4.38□□□□□ -1.71
PTPN12-213ENST00000519553 MINDY2Q8NBR6 621 aa4.38□□□□□ -1.71
PTPN12-213ENST00000519553 TMEM237Q96Q45 408 aa4.38□□□□□ -1.71
PTPN12-213ENST00000519553 WRAP53Q9BUR4 548 aaKnown RBP4.38□□□□□ -1.71
PTPN12-213ENST00000519553 ERVK-6Q9BXR3 956 aa4.38□□□□□ -1.71
PTPN12-213ENST00000519553 SPASTQ9UBP0 616 aa4.38□□□□□ -1.71
PTPN12-213ENST00000519553 CLEC4EQ9ULY5 219 aa4.38□□□□□ -1.71
PTPN12-213ENST00000519553 BARX2Q9UMQ3 279 aaPredicted RBP4.38□□□□□ -1.71
PTPN12-213ENST00000519553 ZNF646O15015 1829 aaPredicted RBP4.37□□□□□ -1.71
PTPN12-213ENST00000519553 ABCC9O60706 1549 aa4.37□□□□□ -1.71
PTPN12-213ENST00000519553 CFAP65Q6ZU64 1925 aaKnown RBP4.37□□□□□ -1.71
PTPN12-213ENST00000519553 IGHV1-2P23083 117 aa4.37□□□□□ -1.71
PTPN12-213ENST00000519553 RPS6P62753 249 aaKnown RBP4.37□□□□□ -1.71
PTPN12-213ENST00000519553 SRYQ05066 204 aa4.37□□□□□ -1.71
PTPN12-213ENST00000519553 IL18R1Q13478 541 aa4.37□□□□□ -1.71
PTPN12-213ENST00000519553 PDIA5Q14554 519 aa4.37□□□□□ -1.71
PTPN12-213ENST00000519553 RAB35Q15286 201 aa4.37□□□□□ -1.71
PTPN12-213ENST00000519553 TTC31Q49AM3 519 aaPredicted RBP4.37□□□□□ -1.71
PTPN12-213ENST00000519553 RSBN1Q5VWQ0 802 aaPredicted RBP4.37□□□□□ -1.71
PTPN12-213ENST00000519553 SLC22A10Q63ZE4 541 aa4.37□□□□□ -1.71
PTPN12-213ENST00000519553 P4HA3Q7Z4N8 544 aa4.37□□□□□ -1.71
PTPN12-213ENST00000519553 NET1Q7Z628 596 aaPredicted RBP4.37□□□□□ -1.71
PTPN12-213ENST00000519553 UBQLNLQ8IYU4 475 aa4.37□□□□□ -1.71
PTPN12-213ENST00000519553 RNF148Q8N7C7 305 aa4.37□□□□□ -1.71
PTPN12-213ENST00000519553 ADIPOR1Q96A54 375 aa4.37□□□□□ -1.71
PTPN12-213ENST00000519553 ATG10Q9H0Y0 220 aa4.37□□□□□ -1.71
PTPN12-213ENST00000519553 TMEM231Q9H6L2 316 aa4.37□□□□□ -1.71
PTPN12-213ENST00000519553 EXOSC3Q9NQT5 275 aaKnown RBP4.37□□□□□ -1.71
PTPN12-213ENST00000519553 EXOSC1Q9Y3B2 195 aaKnown RBP4.37□□□□□ -1.71
PTPN12-213ENST00000519553 E9PMD0 336 aa4.36□□□□□ -1.71
PTPN12-213ENST00000519553 H0YL77 283 aa4.36□□□□□ -1.71
PTPN12-213ENST00000519553 SGK494L7N484 410 aa4.36□□□□□ -1.71
PTPN12-213ENST00000519553 CDX4O14627 284 aaPredicted RBP4.36□□□□□ -1.71
PTPN12-213ENST00000519553 ALOX15BO15296 676 aa4.36□□□□□ -1.71
PTPN12-213ENST00000519553 TM9SF1O15321 606 aa4.36□□□□□ -1.71
PTPN12-213ENST00000519553 CCDC192P0DO97 292 aa4.36□□□□□ -1.71
PTPN12-213ENST00000519553 SDC1P18827 310 aa4.36□□□□□ -1.71
PTPN12-213ENST00000519553 ACVR1BP36896 505 aa4.36□□□□□ -1.71
PTPN12-213ENST00000519553 CD47Q08722 323 aa4.36□□□□□ -1.71
PTPN12-213ENST00000519553 BEND6Q5SZJ8 279 aaPredicted RBP4.36□□□□□ -1.71
PTPN12-213ENST00000519553 C9orf129Q5T035 196 aaKnown RBP4.36□□□□□ -1.71
PTPN12-213ENST00000519553 PARGQ86W56 976 aa4.36□□□□□ -1.71
PTPN12-213ENST00000519553 FBXO16Q8IX29 292 aaPredicted RBP4.36□□□□□ -1.71
PTPN12-213ENST00000519553 OR56B1Q8NGI3 324 aa4.36□□□□□ -1.71
PTPN12-213ENST00000519553 OR13F1Q8NGS4 319 aa4.36□□□□□ -1.71
PTPN12-213ENST00000519553 CCDC26Q8TAB7 109 aa4.36□□□□□ -1.71
PTPN12-213ENST00000519553 FAF2Q96CS3 445 aa4.36□□□□□ -1.71
PTPN12-213ENST00000519553 ELOVL4Q9GZR5 314 aa4.36□□□□□ -1.71
PTPN12-213ENST00000519553 DUS2Q9NX74 493 aaKnown RBP4.36□□□□□ -1.71
PTPN12-213ENST00000519553 GHRLQ9UBU3 117 aa4.36□□□□□ -1.71
PTPN12-213ENST00000519553 PLEKHA6Q9Y2H5 1048 aa4.36□□□□□ -1.71
PTPN12-213ENST00000519553 UBE4BO95155 1302 aa4.36□□□□□ -1.71
PTPN12-213ENST00000519553 METP08581 1390 aa4.36□□□□□ -1.71
PTPN12-213ENST00000519553 TTC26A0AVF1 554 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 RNF222A6NCQ9 220 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 LATO43561 262 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 MT-ATP6P00846 226 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 RALAP11233 206 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 STMN1P16949 149 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 ZNF19P17023 458 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 LYZP61626 148 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 IL9RQ01113 521 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 SERTAD2Q14140 314 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 KIAA0040Q15053 153 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 KDM8Q8N371 416 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 MRPL43Q8N983 215 aaKnown RBP4.35□□□□□ -1.71
PTPN12-213ENST00000519553 NFAM1Q8NET5 270 aaPredicted RBP4.35□□□□□ -1.71
PTPN12-213ENST00000519553 ADAMTS16Q8TE57 1224 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 NCLNQ969V3 563 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 SAMD8Q96LT4 415 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 DPH7Q9BTV6 452 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 NMNAT2Q9BZQ4 307 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 ELOVL2Q9NXB9 296 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 GDAP2Q9NXN4 497 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.35□□□□□ -1.71
PTPN12-213ENST00000519553 KLRF1Q9NZS2 232 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 DPM3Q9P2X0 92 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 P2RX2Q9UBL9 471 aa4.35□□□□□ -1.71
PTPN12-213ENST00000519553 ZNF256Q9Y2P7 627 aaPredicted RBP4.35□□□□□ -1.71
PTPN12-213ENST00000519553 E7ENQ6 273 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms