RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 GNA13Q14344 377 aa13.5□□□□□ -0.25
CLN8-204ENST00000519254 PRAMEF8Q5VWM4 474 aa13.5□□□□□ -0.25
CLN8-204ENST00000519254 PRAMEF7Q5VXH5 474 aa13.5□□□□□ -0.25
CLN8-204ENST00000519254 APLFQ8IW19 511 aaPredicted RBP13.5□□□□□ -0.25
CLN8-204ENST00000519254 SLC16A11Q8NCK7 471 aa13.5□□□□□ -0.25
CLN8-204ENST00000519254 PIK3C3Q8NEB9 887 aa13.5□□□□□ -0.25
CLN8-204ENST00000519254 TSPAN14Q8NG11 270 aa13.5□□□□□ -0.25
CLN8-204ENST00000519254 OR4D11Q8NGI4 311 aa13.5□□□□□ -0.25
CLN8-204ENST00000519254 DOK4Q8TEW6 326 aa13.5□□□□□ -0.25
CLN8-204ENST00000519254 RASSF5Q8WWW0 418 aa13.5□□□□□ -0.25
CLN8-204ENST00000519254 PROX1Q92786 737 aa13.5□□□□□ -0.25
CLN8-204ENST00000519254 LIN37Q96GY3 246 aaPredicted RBP13.5□□□□□ -0.25
CLN8-204ENST00000519254 ZNF354BQ96LW1 612 aa13.5□□□□□ -0.25
CLN8-204ENST00000519254 WFDC6Q9BQY6 131 aa13.5□□□□□ -0.25
CLN8-204ENST00000519254 ULBP3Q9BZM4 244 aa13.5□□□□□ -0.25
CLN8-204ENST00000519254 PRTFDC1Q9NRG1 225 aa13.5□□□□□ -0.25
CLN8-204ENST00000519254 GIN1Q9NXP7 522 aa13.5□□□□□ -0.25
CLN8-204ENST00000519254 CTSFQ9UBX1 484 aa13.5□□□□□ -0.25
CLN8-204ENST00000519254 C19orf53Q9UNZ5 99 aaPredicted RBP13.5□□□□□ -0.25
CLN8-204ENST00000519254 SEC16AO15027 2179 aa13.5□□□□□ -0.25
CLN8-204ENST00000519254 LOC100130705A0A1B0GUX0 176 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 FFAR1O14842 300 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 SEMA7AO75326 666 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 HBQ1P09105 142 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 CDK4P11802 303 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 ATP6V1B1P15313 513 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 CSRP1P21291 193 aaKnown RBP13.49□□□□□ -0.25
CLN8-204ENST00000519254 MAOAP21397 527 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 EXOC3L2Q2M3D2 409 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 MINDY4Q4G0A6 757 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 KCTD21Q4G0X4 260 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 GPAT3Q53EU6 434 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 VWA2Q5GFL6 755 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 C3orf38Q5JPI3 329 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 DCAF12Q5T6F0 453 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 HEPHL1Q6MZM0 1159 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 CDC73Q6P1J9 531 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 KRT73Q86Y46 540 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 OR52J3Q8NH60 311 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 GIPC3Q8TF64 312 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 BTBD2Q9BX70 525 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 SLC38A1Q9H2H9 487 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 LIPT1Q9Y234 373 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 FAM32AQ9Y421 112 aaKnown RBP13.49□□□□□ -0.25
CLN8-204ENST00000519254 B3GALT1Q9Y5Z6 326 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 PCNX2A6NKB5 2137 aa13.49□□□□□ -0.25
CLN8-204ENST00000519254 A0A087WV62 115 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 CCDC187A0A096LP49 1063 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 CLDN4O14493 209 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 PLOD3O60568 738 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 ZIC2O95409 532 aaPredicted RBP13.48□□□□□ -0.25
CLN8-204ENST00000519254 EPPINO95925 133 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 DCDP81605 110 aaKnown RBP13.48□□□□□ -0.25
CLN8-204ENST00000519254 STX4Q12846 297 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 PRICKLE4Q2TBC4 344 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 NKAIN1Q4KMZ8 207 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 EXOSC6Q5RKV6 272 aaKnown RBP13.48□□□□□ -0.25
CLN8-204ENST00000519254 SHISA6Q6ZSJ9 500 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 THAP5Q7Z6K1 395 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 HMGN2P46Q86SG4 172 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 MARCH9Q86YJ5 346 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 RBM45Q8IUH3 476 aaKnown RBP13.48□□□□□ -0.25
CLN8-204ENST00000519254 LACC1Q8IV20 430 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 ZNF595Q8IYB9 648 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 C8orf59Q8N0T1 100 aaPredicted RBP13.48□□□□□ -0.25
CLN8-204ENST00000519254 ATG16L2Q8NAA4 619 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 ZNF675Q8TD23 568 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 ADAMTS15Q8TE58 950 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 TRNT1Q96Q11 434 aaKnown RBP13.48□□□□□ -0.25
CLN8-204ENST00000519254 GRIP2Q9C0E4 1043 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 SLC22A11Q9NSA0 550 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 KRT84Q9NSB2 600 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 MAT2BQ9NZL9 334 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 KCND3Q9UK17 655 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 PCDHGA8Q9Y5G5 932 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 DSPPQ9NZW4 1301 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 TEX51A0A1B0GUA7 166 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 DUXAA6NLW8 204 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 E9PQ18 207 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 TGFBR3LH3BV60 316 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 PCDH17O14917 1159 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 PLD2O14939 933 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 IFI6P09912 130 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 CT62P0C5K7 136 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 SLC35E2P0CK97 266 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 ACP2P11117 423 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 NT5EP21589 574 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 RPL5P46777 297 aaKnown RBP13.48□□□□□ -0.25
CLN8-204ENST00000519254 CLK3P49761 638 aaKnown RBP13.48□□□□□ -0.25
CLN8-204ENST00000519254 CDH15P55291 814 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 FOXL2P58012 376 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 RAB15P59190 212 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 CHRNEQ04844 493 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 GANABQ14697 944 aaKnown RBP13.48□□□□□ -0.25
CLN8-204ENST00000519254 MICAQ29983 383 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 LIN52Q52LA3 116 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 ATAD3BQ5T9A4 648 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 TCTN3Q6NUS6 607 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 DGAT2L6Q6ZPD8 337 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 COX15Q7KZN9 410 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms