RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ALPPL2P10696 532 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 MBL2P11226 248 aaPredicted RBP2.88□□□□□ -1.95
VPS13B-207ENST00000518569 PRKACBP22694 351 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 CCND2P30279 289 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 NUP62P37198 522 aaPredicted RBP2.88□□□□□ -1.95
VPS13B-207ENST00000518569 ID1P41134 155 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 NSFP46459 744 aaKnown RBP2.88□□□□□ -1.95
VPS13B-207ENST00000518569 RPL34P49207 117 aaKnown RBP2.88□□□□□ -1.95
VPS13B-207ENST00000518569 LIMK2P53671 638 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 GEMP55040 296 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 HERV-K104P63124 156 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 CTAG1AP78358 180 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 MRPS15P82914 257 aaKnown RBP2.88□□□□□ -1.95
VPS13B-207ENST00000518569 DNAJC3Q13217 504 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 ITPK1Q13572 414 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 DPYSQ14117 519 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 DOC2AQ14183 400 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 GAMTQ14353 236 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 PDK1Q15118 436 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 RCN1Q15293 331 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 ZMYND11Q15326 602 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 ZNF239Q16600 458 aaKnown RBP2.88□□□□□ -1.95
VPS13B-207ENST00000518569 HAGHQ16775 308 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 TMEM44Q2T9K0 475 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 EPC2Q52LR7 807 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 RIPPLY2Q5TAB7 128 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 WDR25Q64LD2 544 aaPredicted RBP2.88□□□□□ -1.95
VPS13B-207ENST00000518569 ZNF774Q6NX45 483 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 ERICH5Q6P6B1 374 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 METAP1DQ6UB28 335 aaPredicted RBP2.88□□□□□ -1.95
VPS13B-207ENST00000518569 Q6ZR54 194 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 CENPQQ7L2Z9 268 aaPredicted RBP2.88□□□□□ -1.95
VPS13B-207ENST00000518569 GPR142Q7Z601 462 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 CEACAM19Q7Z692 300 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 SERPINA12Q8IW75 414 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 CNTN4Q8IWV2 1026 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 PARP8Q8N3A8 854 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 ARFGAP2Q8N6H7 521 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 CHDHQ8NE62 594 aaPredicted RBP2.88□□□□□ -1.95
VPS13B-207ENST00000518569 OR4F5Q8NH21 305 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 FBXO25Q8TCJ0 367 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 SLC13A3Q8WWT9 602 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 RAB7BQ96AH8 199 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 LRRC39Q96DD0 335 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 RPGRIP1Q96KN7 1286 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 GPR137Q96N19 417 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 C19orf43Q9BQ61 176 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 SIKE1Q9BRV8 207 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 THUMPD2Q9BTF0 503 aaKnown RBP2.88□□□□□ -1.95
VPS13B-207ENST00000518569 TRPV6Q9H1D0 765 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 LIME1Q9H400 295 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 HAUS4Q9H6D7 363 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 DCLRE1BQ9H816 532 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 MED4Q9NPJ6 270 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 RPRD1BQ9NQG5 326 aaKnown RBP2.88□□□□□ -1.95
VPS13B-207ENST00000518569 SLC7A10Q9NS82 523 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 PIGVQ9NUD9 493 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 RAB20Q9NX57 234 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 APPL1Q9UKG1 709 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 CCPG1Q9ULG6 757 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 RPH3AQ9Y2J0 694 aaPredicted RBP2.88□□□□□ -1.95
VPS13B-207ENST00000518569 FBXO7Q9Y3I1 522 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 ATP6V1DQ9Y5K8 247 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 CLCA3PQ9Y6N3 262 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 V9GYY5 206 aaPredicted RBP2.88□□□□□ -1.95
VPS13B-207ENST00000518569 MAPKBP1O60336 1514 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 PLEKHG2Q9H7P9 1386 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 ADAMTS12P58397 1594 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 MADDQ8WXG6 1647 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 TEX48A0A1B0GUV7 120 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 ZNF840PA6NDX5 716 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 FAM47DPA6NHR8 397 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 NCF1BA6NI72 391 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-207ENST00000518569 NCF1CA8MVU1 366 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-207ENST00000518569 RSPH10B2B2RC85 870 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 DUSP11O75319 330 aaKnown RBP2.87□□□□□ -1.95
VPS13B-207ENST00000518569 GMNNO75496 209 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 CRTAPO75718 401 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-207ENST00000518569 KRT14P02533 472 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 MELTFP08582 738 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 RSPH10BP0C881 870 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 EPB41P11171 864 aaKnown RBP2.87□□□□□ -1.95
VPS13B-207ENST00000518569 RALAP11233 206 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 ZNF18P17022 549 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 UGT1A6P19224 532 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 GLRA2P23416 452 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 BMI1P35226 326 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 NDST1P52848 882 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 AP3M2P53677 418 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 HADHBP55084 474 aaKnown RBP2.87□□□□□ -1.95
VPS13B-207ENST00000518569 CASP9P55211 416 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 YBEYP58557 167 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-207ENST00000518569 TPM4P67936 248 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 CCZ1BP86790 482 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 CCZ1P86791 482 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-207ENST00000518569 SCGB2A2Q13296 93 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 GPM6BQ13491 265 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 CUL1Q13616 776 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 EMC2Q15006 297 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 ANKRD55Q3KP44 614 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms