RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 GLIPR2Q9H4G4 154 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 C3orf14Q9HBI5 128 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 EML4Q9HC35 981 aaKnown RBP12.44□□□□□ -0.42
TCOF1-215ENST00000515516 Q9N2J8 555 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 PPP4R1LQ9P1A2 415 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 FOXD3Q9UJU5 478 aaPredicted RBP12.44□□□□□ -0.42
TCOF1-215ENST00000515516 CBLCQ9ULV8 474 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 C19orf53Q9UNZ5 99 aaPredicted RBP12.44□□□□□ -0.42
TCOF1-215ENST00000515516 L3MBTL1Q9Y468 752 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 PLOD2O00469 737 aa12.43□□□□□ -0.42
TCOF1-215ENST00000515516 DDX5P17844 614 aaKnown RBP12.43□□□□□ -0.42
TCOF1-215ENST00000515516 GRK2P25098 689 aa12.43□□□□□ -0.42
TCOF1-215ENST00000515516 GPC1P35052 558 aa12.43□□□□□ -0.42
TCOF1-215ENST00000515516 DLX5P56178 289 aa12.43□□□□□ -0.42
TCOF1-215ENST00000515516 DCST1Q5T197 706 aa12.43□□□□□ -0.42
TCOF1-215ENST00000515516 OR5M10Q6IEU7 315 aa12.43□□□□□ -0.42
TCOF1-215ENST00000515516 CHMP1BQ7LBR1 199 aa12.43□□□□□ -0.42
TCOF1-215ENST00000515516 KIF18BQ86Y91 864 aa12.43□□□□□ -0.42
TCOF1-215ENST00000515516 DDIASQ8IXT1 998 aa12.43□□□□□ -0.42
TCOF1-215ENST00000515516 ZZZ3Q8IYH5 903 aa12.43□□□□□ -0.42
TCOF1-215ENST00000515516 NAXEQ8NCW5 288 aa12.43□□□□□ -0.42
TCOF1-215ENST00000515516 OR4N2Q8NGD1 307 aa12.43□□□□□ -0.42
TCOF1-215ENST00000515516 ZFP28Q8NHY6 868 aa12.43□□□□□ -0.42
TCOF1-215ENST00000515516 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.43□□□□□ -0.42
TCOF1-215ENST00000515516 GFM2Q969S9 779 aaKnown RBP12.43□□□□□ -0.42
TCOF1-215ENST00000515516 ELP4Q96EB1 424 aa12.43□□□□□ -0.42
TCOF1-215ENST00000515516 APOPT1Q96IL0 206 aa12.43□□□□□ -0.42
TCOF1-215ENST00000515516 TM9SF2Q99805 663 aa12.43□□□□□ -0.42
TCOF1-215ENST00000515516 FBXL2Q9UKC9 423 aa12.43□□□□□ -0.42
TCOF1-215ENST00000515516 MRPS18CQ9Y3D5 142 aaKnown RBP12.43□□□□□ -0.42
TCOF1-215ENST00000515516 LRBAP50851 2863 aa12.43□□□□□ -0.42
TCOF1-215ENST00000515516 CSMD1Q96PZ7 3565 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 APCP25054 2843 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 MBD3L4A6NDZ8 208 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-215ENST00000515516 MBD3L3A6NE82 208 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-215ENST00000515516 MBD3L5A6NJ08 208 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-215ENST00000515516 TTC36A6NLP5 189 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 KDM4EB2RXH2 506 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-215ENST00000515516 EEF1E1-BLOC1S5C9J1V9 151 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 UPK1AO00322 258 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 PDPK1O15530 556 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 EEF1E1O43324 174 aaKnown RBP12.42□□□□□ -0.42
TCOF1-215ENST00000515516 SCO2O43819 266 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 LINC00032P0C843 101 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 TMIGD3P0DMS9 266 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-215ENST00000515516 PRPH2P23942 346 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 DPP4P27487 766 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 EVI2BP34910 448 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 RFX3P48380 749 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 DSCR4P56555 118 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-215ENST00000515516 PSG6Q00889 435 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 HSPB3Q12988 150 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 PRSS53Q2L4Q9 553 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 OR2L13Q8N349 312 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 RELL2Q8NC24 303 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-215ENST00000515516 OR2W6PQ8NHA6 318 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 MBD3L2Q8NHZ7 208 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-215ENST00000515516 PPCDCQ96CD2 204 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 TUBA1CQ9BQE3 449 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 GATA5Q9BWX5 397 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-215ENST00000515516 ACBD3Q9H3P7 528 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 TNFRSF12AQ9NP84 129 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 MKS1Q9NXB0 559 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 SH3BP4Q9P0V3 963 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 EDARQ9UNE0 448 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 ABCG2Q9UNQ0 655 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 RPH3AQ9Y2J0 694 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-215ENST00000515516 TMED5Q9Y3A6 229 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 PKDREJQ9NTG1 2253 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 ZNF407Q9C0G0 2248 aa12.42□□□□□ -0.42
TCOF1-215ENST00000515516 NPIPB8E9PQR5 432 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 AKAP10O43572 662 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 NPHS1O60500 1241 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 KCNH1O95259 989 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 IL18BPO95998 194 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 IFI6P09912 130 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 PRPS2P11908 318 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 TCEA1P23193 301 aaKnown RBP12.41□□□□□ -0.42
TCOF1-215ENST00000515516 CHMP24386 653 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 TACR1P25103 407 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 GABRA3P34903 492 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 AGFG1P52594 562 aaKnown RBP12.41□□□□□ -0.42
TCOF1-215ENST00000515516 ZNF136P52737 540 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 PRKAG1P54619 331 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 MANFP55145 182 aaKnown RBP12.41□□□□□ -0.42
TCOF1-215ENST00000515516 EEF1A1P68104 462 aaKnown RBP12.41□□□□□ -0.42
TCOF1-215ENST00000515516 GAB1Q13480 694 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 SNTB1Q13884 538 aaKnown RBP12.41□□□□□ -0.42
TCOF1-215ENST00000515516 PCLAFQ15004 111 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 KIAA0040Q15053 153 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 FBXL19-AS1Q494R0 122 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 GALNTL6Q49A17 601 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 VPS26BQ4G0F5 336 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 EEF1A1P5Q5VTE0 462 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 RNF165Q6ZSG1 346 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 R3HCC1LQ7Z5L2 792 aaKnown RBP12.41□□□□□ -0.42
TCOF1-215ENST00000515516 BANPQ8N9N5 519 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 CEP70Q8NHQ1 597 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 FAM222BQ8WU58 562 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 WNT2BQ93097 391 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms