RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	VPS54	Q9P1Q0	977 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	SPAST	Q9UBP0	616 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	FBXW2	Q9UKT8	454 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	HPCAL4	Q9UM19	191 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	CA5B	Q9Y2D0	317 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	TDRKH	Q9Y2W6	561 aa	Known RBP	2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	STRAP	Q9Y3F4	350 aa	Known RBP	2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	DHX29	Q7Z478	1369 aa	Known RBP	2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	C5orf51	A6NDU8	294 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402		G3V3Y1	287 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	LCMT2	O60294	686 aa	Known RBP	2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	PDE5A	O76074	875 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	OAS1	P00973	400 aa	Known RBP	2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	PDHB	P11177	359 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	B4GALT1	P15291	398 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	RPS2	P15880	293 aa	Known RBP	2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	AHCY	P23526	432 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	PTPN4	P29074	926 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	PBLD	P30039	288 aa	Predicted RBP	2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	SAA4	P35542	130 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	PEX19	P40855	299 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	ACAA2	P42765	397 aa	Known RBP	2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	MAGEA4	P43358	317 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	IFNAR2	P48551	515 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	UCP2	P55851	309 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	HKDC1	Q2TB90	917 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	C12orf60	Q5U649	245 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	RGS9BP	Q6ZS82	235 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	CCDC110	Q8TBZ0	833 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	FNDC8	Q8TC99	324 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	RAB3C	Q96E17	227 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	ZNF285	Q96NJ3	590 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	ZNF702P	Q9H963	129 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	SYTL2	Q9HCH5	934 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	MYOZ2	Q9NPC6	264 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	FANCF	Q9NPI8	374 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	ESM1	Q9NQ30	184 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	MIEF1	Q9NQG6	463 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	PLSCR3	Q9NRY6	295 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	SLC35D1	Q9NTN3	355 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	HMG20B	Q9P0W2	317 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	LAMP5	Q9UJQ1	280 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	FLVCR1	Q9Y5Y0	555 aa		2.76	□□□□□ -1.97
MATR3-223	ENST00000514402	SH2D1B	O14796	132 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	SLC2A10	O95528	541 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	DIRAS3	O95661	229 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	ACTL6A	O96019	429 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	HSPB1	P04792	205 aa	Known RBP	2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	APRT	P07741	180 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	CCDC192	P0DO97	292 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	NR2C1	P13056	603 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	OR1D4	P47884	311 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	ALDH3B2	P48448	385 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	HNMT	P50135	292 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	SERPINH1	P50454	418 aa	Known RBP	2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	ZNF133	P52736	654 aa	Predicted RBP	2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	METAP1	P53582	386 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	RPS4X	P62701	263 aa	Known RBP	2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	ZNF85	Q03923	595 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	ZNF33B	Q06732	778 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	SERTAD2	Q14140	314 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	EXOSC7	Q15024	291 aa	Known RBP	2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	CEP55	Q53EZ4	464 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	CELF3	Q5SZQ8	465 aa	Known RBP	2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	OTP	Q5XKR4	325 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	IGFL3	Q6UXB1	125 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	TFAP2E	Q6VUC0	442 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	TOM1L2	Q6ZVM7	507 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	STH	Q8IWL8	128 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	ELMOD2	Q8IZ81	293 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	CADM2	Q8N3J6	435 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	RNF175	Q8N4F7	328 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	RELL2	Q8NC24	303 aa	Predicted RBP	2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	OR52E1	Q8NGJ3	308 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	RNASE8	Q8TDE3	154 aa	Known RBP	2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	SHC3	Q92529	594 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	MRPL38	Q96DV4	380 aa	Known RBP	2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	NT5C3A	Q9H0P0	336 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	NRN1	Q9NPD7	142 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	MAD2L2	Q9UI95	211 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	PDE10A	Q9Y233	779 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	ARHGAP23	Q9P227	1491 aa		2.75	□□□□□ -1.97
MATR3-223	ENST00000514402	KIF7	Q2M1P5	1343 aa		2.74	□□□□□ -1.97
MATR3-223	ENST00000514402	CLRN2	A0PK11	232 aa		2.74	□□□□□ -1.97
MATR3-223	ENST00000514402	PINLYP	A6NC86	204 aa		2.74	□□□□□ -1.97
MATR3-223	ENST00000514402	EI24	O14681	340 aa		2.74	□□□□□ -1.97
MATR3-223	ENST00000514402	AKR7A3	O95154	331 aa		2.74	□□□□□ -1.97
MATR3-223	ENST00000514402	MT-ATP6	P00846	226 aa		2.74	□□□□□ -1.97
MATR3-223	ENST00000514402	TGFA	P01135	160 aa		2.74	□□□□□ -1.97
MATR3-223	ENST00000514402	PROS1	P07225	676 aa		2.74	□□□□□ -1.97
MATR3-223	ENST00000514402	ABHD2	P08910	425 aa		2.74	□□□□□ -1.97
MATR3-223	ENST00000514402	WNT2	P09544	360 aa		2.74	□□□□□ -1.97
MATR3-223	ENST00000514402	HOXB7	P09629	217 aa		2.74	□□□□□ -1.97
MATR3-223	ENST00000514402	TSPY4	P0CV99	314 aa		2.74	□□□□□ -1.97
MATR3-223	ENST00000514402	TSPY10	P0CW01	314 aa		2.74	□□□□□ -1.97
MATR3-223	ENST00000514402	HSPA5	P11021	654 aa	Known RBP	2.74	□□□□□ -1.97
MATR3-223	ENST00000514402	NCF1	P14598	390 aa	Predicted RBP	2.74	□□□□□ -1.97
MATR3-223	ENST00000514402	ARF4	P18085	180 aa	Predicted RBP	2.74	□□□□□ -1.97
MATR3-223	ENST00000514402	ACADSB	P45954	432 aa		2.74	□□□□□ -1.97

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms