RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 HS6ST1O60243 411 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 NKX2-2O95096 273 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 CLPSP04118 112 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 CT45A8P0DMV1 189 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 CT45A9P0DMV2 189 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 OR12D1P0DN82 309 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 T-ENOLP0DO92 83 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 NR2F1P10589 423 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 GPX2P18283 190 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 ATP6V1C1P21283 382 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 SLC6A2P23975 617 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 TRHRP34981 398 aaPredicted RBP9.39□□□□□ -0.91
NEDD9-214ENST00000513989 CASRP41180 1078 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 SSR4P51571 173 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 MLF1P58340 268 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 DSTNP60981 165 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 RPP38P78345 283 aaKnown RBP9.39□□□□□ -0.91
NEDD9-214ENST00000513989 POU6F2P78424 691 aaPredicted RBP9.39□□□□□ -0.91
NEDD9-214ENST00000513989 HPCAP84074 193 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 RBBP4Q09028 425 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 EBPQ15125 230 aaKnown RBP9.39□□□□□ -0.91
NEDD9-214ENST00000513989 CYP51A1Q16850 503 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 CT45A2Q5DJT8 189 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 SAMD4BQ5PRF9 694 aaKnown RBP9.39□□□□□ -0.91
NEDD9-214ENST00000513989 ACER2Q5QJU3 275 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.39□□□□□ -0.91
NEDD9-214ENST00000513989 GCNT6Q5T4J0 391 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 TCTN3Q6NUS6 607 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 TNFAIP8L2Q6P589 184 aaPredicted RBP9.39□□□□□ -0.91
NEDD9-214ENST00000513989 OPN5Q6U736 354 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 ISLR2Q6UXK2 745 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 C16orf62Q7Z3J2 963 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 SERPINA11Q86U17 422 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 SLC30A8Q8IWU4 369 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 DEFB107AQ8IZN7 70 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 KIF2BQ8N4N8 673 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 METTL25Q8N6Q8 603 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 HORMAD2Q8N7B1 307 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 SLC16A11Q8NCK7 471 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 PNPT1Q8TCS8 783 aaKnown RBP9.39□□□□□ -0.91
NEDD9-214ENST00000513989 BRIX1Q8TDN6 353 aaKnown RBP9.39□□□□□ -0.91
NEDD9-214ENST00000513989 ASB15Q8WXK1 588 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 TM9SF4Q92544 642 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 SLC35A4Q96G79 324 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 AURKBQ96GD4 344 aaPredicted RBP9.39□□□□□ -0.91
NEDD9-214ENST00000513989 OR7D2Q96RA2 312 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 CDRT15Q96T59 188 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 GPATCH1Q9BRR8 931 aaKnown RBP9.39□□□□□ -0.91
NEDD9-214ENST00000513989 BTBD10Q9BSF8 475 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 HOXD1Q9GZZ0 328 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 OR51I1Q9H343 314 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 KAT8Q9H7Z6 458 aaKnown RBP9.39□□□□□ -0.91
NEDD9-214ENST00000513989 SLC6A13Q9NSD5 602 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 GPR83Q9NYM4 423 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 SLC25A37Q9NYZ2 338 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 P2RX2Q9UBL9 471 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 CBLCQ9ULV8 474 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 ZNF451Q9Y4E5 1061 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 KCNMB2Q9Y691 235 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 FER1L5A0AVI2 2057 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 CCDC88CQ9P219 2028 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 ICE1Q9Y2F5 2266 aa9.39□□□□□ -0.91
NEDD9-214ENST00000513989 MKRN2OSH3BPM6 223 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 TP53I11O14683 189 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 TO15178 435 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 GSTA4O15217 222 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 STX11O75558 287 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 ITGA10O75578 1167 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 REM1O75628 298 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 OR2J2O76002 312 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 STAMBPO95630 424 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 IL12BP29460 328 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 LCN1P31025 176 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 SOX18P35713 384 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 CLK3P49761 638 aaKnown RBP9.38□□□□□ -0.91
NEDD9-214ENST00000513989 CASP9P55211 416 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 EEFSECP57772 596 aaKnown RBP9.38□□□□□ -0.91
NEDD9-214ENST00000513989 RPS26P62854 115 aaKnown RBP9.38□□□□□ -0.91
NEDD9-214ENST00000513989 SLC25A3Q00325 362 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 KCNC4Q03721 635 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 PLCXD2Q0VAA5 305 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 Q0VFX4 171 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 DUSP8Q13202 625 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 EFR3AQ14156 821 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 GTDC1Q4AE62 458 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 ERICH5Q6P6B1 374 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 MSRB3Q8IXL7 192 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 GPALPP1Q8IXQ4 340 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 SLC34A3Q8N130 599 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 ARMC10Q8N2F6 343 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 SIRT6Q8N6T7 355 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 C11orf65Q8NCR3 313 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 RBM15BQ8NDT2 890 aaKnown RBP9.38□□□□□ -0.91
NEDD9-214ENST00000513989 SIMC1Q8NDZ2 872 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 OR10A6Q8NH74 314 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 HOXB13Q92826 284 aaPredicted RBP9.38□□□□□ -0.91
NEDD9-214ENST00000513989 PMM1Q92871 262 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 TMCO6Q96DC7 493 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 SGCZQ96LD1 299 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 TRNT1Q96Q11 434 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms