RNA–Protein interactions for RNA: ENST00000512820.5

LIMCH1-216, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-216ENST00000512820 NCR1O76036 304 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 NPPBP16860 134 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 SYN1P17600 705 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 RAB3BP20337 219 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 UQCRC1P31930 480 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 MC3RP41968 323 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 RAB28P51157 221 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 PIP5KL1Q5T9C9 394 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 PPP2R2DQ66LE6 453 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 FAM71E1Q6IPT2 247 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 RPL13AP3Q6NVV1 102 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 KRT77Q7Z794 578 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 CCDC36Q8IYA8 594 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 MS4A15Q8N5U1 240 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 C15orf40Q8WUR7 153 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 DNAJA4Q8WW22 397 aaPredicted RBP7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 ZNF582Q96NG8 517 aaPredicted RBP7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 MACROD1Q9BQ69 325 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 POLDIP3Q9BY77 421 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 MTHFD2LQ9H903 347 aaPredicted RBP7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 MRPL15Q9P015 296 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 DIMT1Q9UNQ2 313 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 LATO43561 262 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 WISP3O95389 354 aaPredicted RBP7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 IFNA6P05013 189 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 FCER2P06734 321 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 HTR1AP08908 422 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 SNRPGP62308 76 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 CAMK1Q14012 370 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 ZNF385BQ569K4 471 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 C3orf38Q5JPI3 329 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 PYHIN1Q6K0P9 492 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 RAB7BQ96AH8 199 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 ACTRT3Q9BYD9 372 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 DPH1Q9BZG8 443 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 ACTR6Q9GZN1 396 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 FBXL12Q9NXK8 326 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 PCDH10Q9P2E7 1040 aa7.94□□□□□ -1.14
LIMCH1-216ENST00000512820 ANTXRLA6NF34 631 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 KDM4BO94953 1096 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 DRD5P21918 477 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 PSMB5P28074 263 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 GABRA5P31644 462 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 GABRA3P34903 492 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 DNASE1L1P49184 302 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 CSRP3P50461 194 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 NKX3-2P78367 333 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 POU6F2P78424 691 aaPredicted RBP7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 ENPP2Q13822 863 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 KIAA0040Q15053 153 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 CDK10Q15131 360 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 MINDY4Q4G0A6 757 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 C2orf27AQ580R0 203 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 SFRP4Q6FHJ7 346 aaPredicted RBP7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 ASPGQ86U10 573 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 REM2Q8IYK8 340 aaPredicted RBP7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 CHST4Q8NCG5 386 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 OR9A2Q8NGT5 310 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 OR2L2Q8NH16 312 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 AHCYL2Q96HN2 611 aaKnown RBP7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 HSPA12BQ96MM6 686 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 MRTO4Q9UKD2 239 aaKnown RBP7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 SLC7A7Q9UM01 511 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 INSL6Q9Y581 213 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 ALG5Q9Y673 324 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 STON1Q9Y6Q2 735 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 TAF1LQ8IZX4 1826 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 FAM183AA6NL82 134 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 M0R082 166 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 GABRPO00591 440 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 UBXN7O94888 489 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 GNRH1P01148 92 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 IGFBP1P08833 259 aaPredicted RBP7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 SPNP16150 400 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 DDOSTP39656 456 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 SOX2P48431 317 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 PSPHP78330 225 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 NTHL1P78549 312 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 FGFBP1Q14512 234 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 SEC23BQ15437 767 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 FLYWCH1Q4VC44 716 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 AKIRIN2Q53H80 203 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 GAREM2Q75VX8 874 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 TAF8Q7Z7C8 310 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 OR52I1Q8NGK6 324 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 OR5W2Q8NH69 310 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 WDR20Q8TBZ3 569 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 FCAMRQ8WWV6 532 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 FKBP10Q96AY3 582 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 NEURL3Q96EH8 262 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 LYSMD1Q96S90 227 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 RBFOX1Q9NWB1 397 aaKnown RBP7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 RWDD3Q9Y3V2 267 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 OR1A2Q9Y585 309 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 PCDHGA3Q9Y5H0 932 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 CACNG2Q9Y698 323 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 TRBV2A0A0J9YWF9 115 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 TRAPPC13A5PLN9 417 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 BLOC1S5-TXNDC5H3BN57 136 aa7.93□□□□□ -1.14
LIMCH1-216ENST00000512820 ABLIM3O94929 683 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms