RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	TSC2	P49815	1807 aa		4.39	□□□□□ -1.71
LINC01088-208	ENST00000511895	MICAL3	Q7RTP6	2002 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	PATJ	Q8NI35	1801 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895		A0A087WWV3	80 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895		A0A0U1RQK1	487 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	ZNF320	A2RRD8	509 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	SRRM4	A7MD48	611 aa	Known RBP	4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	CCS	O14618	274 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	OR6A2	O95222	327 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	GAS8	O95995	478 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	MATK	P42679	507 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	SNU13	P55769	128 aa	Known RBP	4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	CYLC2	Q14093	348 aa	Predicted RBP	4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	SPHAR	Q15513	63 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	ZNF789	Q5FWF6	425 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	CAPN13	Q6MZZ7	669 aa	Predicted RBP	4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	C11orf88	Q6PI97	169 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	LINC00696	Q6ZRV3	163 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	ASPG	Q86U10	573 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	NUP93	Q8N1F7	819 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	FGFRL1	Q8N441	504 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	ZNF781	Q8N8C0	355 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	TYMSOS	Q8TAI1	123 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	TCP11	Q8WWU5	503 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	PRCC	Q92733	491 aa	Predicted RBP	4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	HSD17B14	Q9BPX1	270 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	NAPB	Q9H115	298 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	TRPV6	Q9H1D0	765 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	PSORS1C1	Q9UIG5	152 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	SPATA2	Q9UM82	520 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	FBXO7	Q9Y3I1	522 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	GREB1	Q4ZG55	1949 aa		4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	ANKHD1	Q8IWZ3	2542 aa	Known RBP	4.38	□□□□□ -1.71
LINC01088-208	ENST00000511895	OTOG	Q6ZRI0	2925 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	ATM	Q13315	3056 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	KIAA0513	O60268	411 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	ZNF354A	O60765	605 aa	Predicted RBP	4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	CNMD	O75829	334 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	DCN	P07585	359 aa	Known RBP	4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	SBK2	P0C263	348 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	OR9G9	P0C7N8	305 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	ANPEP	P15144	967 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	TCF7	P36402	384 aa	Predicted RBP	4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	ASIC1	P78348	528 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	TYSND1	Q2T9J0	566 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	KRT77	Q7Z794	578 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	ADCK1	Q86TW2	530 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	TRPV3	Q8NET8	790 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	AGAP11	Q8TF27	550 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	ITLN1	Q8WWA0	313 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	MRPL24	Q96A35	216 aa	Known RBP	4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	PCED1B	Q96HM7	432 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	TESK2	Q96S53	571 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	ACPT	Q9BZG2	426 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	ZNF350	Q9GZX5	532 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	RNPEPL1	Q9HAU8	725 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	ERVK-19	Q9WJR5	959 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	EXOC6B	Q9Y2D4	811 aa		4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	MRPL11	Q9Y3B7	192 aa	Known RBP	4.37	□□□□□ -1.71
LINC01088-208	ENST00000511895	CABIN1	Q9Y6J0	2220 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	ATP6AP2	A0A1C7CYW4	349 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	ZNF724	A8MTY0	619 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	PHOX2A	O14813	284 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	DUSP11	O75319	330 aa	Known RBP	4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	TGDS	O95455	350 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	SEMA4F	O95754	770 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	FH	P07954	510 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	IQCF3	P0C7M6	154 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	FAM200B	P0CF97	657 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	OR1D2	P34982	312 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	ELK3	P41970	407 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	CCR4	P51679	360 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	ADAR	P55265	1226 aa	Known RBP	4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	GSTO1	P78417	241 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	TCP10	Q12799	353 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	NHLRC3	Q5JS37	347 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	APOBEC3H	Q6NTF7	200 aa	Known RBP	4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	ARMCX5	Q6P1M9	558 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	HIPK1	Q86Z02	1210 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	TMEM126B	Q8IUX1	230 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	GPD1L	Q8N335	351 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	FBXL16	Q8N461	479 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	NKAIN3	Q8N8D7	197 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	SAMD12	Q8N8I0	201 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	ZNRF1	Q8ND25	227 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	ICA1L	Q8NDH6	482 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	ESAM	Q96AP7	390 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	CDHR1	Q96JP9	859 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	THUMPD2	Q9BTF0	503 aa	Known RBP	4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	NT5DC2	Q9H857	520 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	ZNF581	Q9P0T4	197 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	ZNF107	Q9UII5	783 aa	Predicted RBP	4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	ATAD5	Q96QE3	1844 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	GRIN2D	O15399	1336 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	MIA3	Q5JRA6	1907 aa		4.36	□□□□□ -1.71
LINC01088-208	ENST00000511895	CACNA1E	Q15878	2313 aa		4.35	□□□□□ -1.71
LINC01088-208	ENST00000511895	HIVEP3	Q5T1R4	2406 aa		4.35	□□□□□ -1.71
LINC01088-208	ENST00000511895	COL5A1	P20908	1838 aa	Predicted RBP	4.35	□□□□□ -1.71
LINC01088-208	ENST00000511895	C5orf67	F2Z3F1	127 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms