RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 CA10Q9NS85 328 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 ZNF629Q9UEG4 869 aaPredicted RBP6.91□□□□□ -1.3
CPNE4-208ENST00000511604 GJD2Q9UKL4 321 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 GSTK1Q9Y2Q3 226 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 OR10H1Q9Y4A9 318 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 MYLKQ15746 1914 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 GABRR3A8MPY1 467 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 UGDHO60701 494 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 NCR1O76036 304 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 FGF19O95750 216 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 C6orf47O95873 294 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 IFNA2P01563 188 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 HIST1H2ABP04908 130 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 STAG3L1P0CL83 205 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 UROSP10746 265 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 ACPPP15309 386 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 ABOP16442 354 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 ZNF14P17017 642 aaPredicted RBP6.9□□□□□ -1.3
CPNE4-208ENST00000511604 TNFRSF1BP20333 461 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 AKAP5P24588 427 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 IGFBP6P24592 240 aaPredicted RBP6.9□□□□□ -1.3
CPNE4-208ENST00000511604 RPS25P62851 125 aaKnown RBP6.9□□□□□ -1.3
CPNE4-208ENST00000511604 SIM1P81133 766 aaPredicted RBP6.9□□□□□ -1.3
CPNE4-208ENST00000511604 HTRA4P83105 476 aaPredicted RBP6.9□□□□□ -1.3
CPNE4-208ENST00000511604 LAMTOR4Q0VGL1 99 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 BOP1Q14137 746 aaKnown RBP6.9□□□□□ -1.3
CPNE4-208ENST00000511604 TRAM1Q15629 374 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 PLK5Q496M5 336 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 TMEM31Q5JXX7 168 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 SPANXN4Q5MJ08 99 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 CLEC2AQ6UVW9 174 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 PTCHD4Q6ZW05 846 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 HIST3H2AQ7L7L0 130 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 BCDIN3DQ7Z5W3 292 aaKnown RBP6.9□□□□□ -1.3
CPNE4-208ENST00000511604 GPR65Q8IYL9 337 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 SLC5A8Q8N695 610 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 GCDHQ92947 438 aaPredicted RBP6.9□□□□□ -1.3
CPNE4-208ENST00000511604 HIST1H2ACQ93077 130 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 ATOH8Q96SQ7 321 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 PIGQQ9BRB3 760 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 TMEM134Q9H6X4 195 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 ZNF302Q9NR11 478 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 TEX10Q9NXF1 929 aaPredicted RBP6.9□□□□□ -1.3
CPNE4-208ENST00000511604 POFUT2Q9Y2G5 429 aa6.9□□□□□ -1.3
CPNE4-208ENST00000511604 TRBV5-3A0A0A0MS03 114 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.9□□□□□ -1.31
CPNE4-208ENST00000511604 OR2M5A3KFT3 312 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 ACOD1A6NK06 481 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 SUPT3HB4E1H0 165 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 AP4M1O00189 453 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 ANKRD34CP0C6C1 535 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 C6P13671 934 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 ELNP15502 786 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 RCC1P18754 421 aaPredicted RBP6.9□□□□□ -1.31
CPNE4-208ENST00000511604 DRD5P21918 477 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 RAB5CP51148 216 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 CCR9P51686 369 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 ADPRHP54922 357 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 ERVPABLB-1P60509 514 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 RAB8AP61006 207 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 PKIAP61925 76 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 MAT1AQ00266 395 aaKnown RBP6.9□□□□□ -1.31
CPNE4-208ENST00000511604 BEX3Q00994 111 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 NHLH2Q02577 135 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 TNFRSF9Q07011 255 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 SREBF2Q12772 1141 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 SLC10A6Q3KNW5 377 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 FAM174BQ3ZCQ3 159 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 ZRANB3Q5FWF4 1079 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 SLC35D3Q5M8T2 416 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 HACD4Q5VWC8 232 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 ARHGAP11AQ6P4F7 1023 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 QSOX2Q6ZRP7 698 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 CFAP206Q8IYR0 622 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 SYNPOQ8N3V7 929 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 SPICQ8N5J4 248 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 C15orf54Q8N8G6 183 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 RASGEF1AQ8N9B8 481 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 CCDC54Q8NEL0 328 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 OR6K3Q8NGY3 331 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 GNPDA2Q8TDQ7 276 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 CHFRQ96EP1 664 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 WDR89Q96FK6 387 aaPredicted RBP6.9□□□□□ -1.31
CPNE4-208ENST00000511604 LRIG1Q96JA1 1093 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 HSH2DQ96JZ2 352 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 LRFN5Q96NI6 719 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 NIPSNAP1Q9BPW8 284 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 NFKBIZQ9BYH8 718 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 TSPAN10Q9H1Z9 355 aaPredicted RBP6.9□□□□□ -1.31
CPNE4-208ENST00000511604 RPF1Q9H9Y2 349 aaKnown RBP6.9□□□□□ -1.31
CPNE4-208ENST00000511604 SLC25A19Q9HC21 320 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 MRPS30Q9NP92 439 aaKnown RBP6.9□□□□□ -1.31
CPNE4-208ENST00000511604 ISYNA1Q9NPH2 558 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 ACSS1Q9NUB1 689 aaPredicted RBP6.9□□□□□ -1.31
CPNE4-208ENST00000511604 WWOXQ9NZC7 414 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 HACL1Q9UJ83 578 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 NEU3Q9UQ49 428 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 SNX11Q9Y5W9 270 aa6.9□□□□□ -1.31
CPNE4-208ENST00000511604 SPIN1Q9Y657 262 aaPredicted RBP6.9□□□□□ -1.31
CPNE4-208ENST00000511604 COL2A1P02458 1487 aaPredicted RBP6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms