RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 FAM109AQ8N4B1 249 aa12.4□□□□□ -0.42
SNF8-206ENST00000509989 WDSUB1Q8N9V3 476 aa12.4□□□□□ -0.42
SNF8-206ENST00000509989 SLC16A11Q8NCK7 471 aa12.4□□□□□ -0.42
SNF8-206ENST00000509989 NUP43Q8NFH3 380 aa12.4□□□□□ -0.42
SNF8-206ENST00000509989 OR5M9Q8NGP3 310 aa12.4□□□□□ -0.42
SNF8-206ENST00000509989 OR5AK3PQ8NH89 298 aa12.4□□□□□ -0.42
SNF8-206ENST00000509989 RNF138Q8WVD3 245 aa12.4□□□□□ -0.42
SNF8-206ENST00000509989 ERP27Q96DN0 273 aa12.4□□□□□ -0.42
SNF8-206ENST00000509989 MTERF3Q96E29 417 aa12.4□□□□□ -0.42
SNF8-206ENST00000509989 SLC35A4Q96G79 324 aa12.4□□□□□ -0.42
SNF8-206ENST00000509989 COL21A1Q96P44 957 aa12.4□□□□□ -0.42
SNF8-206ENST00000509989 KLHDC3Q9BQ90 382 aa12.4□□□□□ -0.42
SNF8-206ENST00000509989 LMF2Q9BU23 707 aaKnown RBP12.4□□□□□ -0.42
SNF8-206ENST00000509989 SERHL2Q9H4I8 314 aa12.4□□□□□ -0.42
SNF8-206ENST00000509989 PNPLA3Q9NST1 481 aa12.4□□□□□ -0.42
SNF8-206ENST00000509989 ACSS1Q9NUB1 689 aaPredicted RBP12.4□□□□□ -0.42
SNF8-206ENST00000509989 ASIC5Q9NY37 505 aa12.4□□□□□ -0.42
SNF8-206ENST00000509989 TAS2R9Q9NYW1 312 aa12.4□□□□□ -0.42
SNF8-206ENST00000509989 MAPRE3Q9UPY8 281 aa12.4□□□□□ -0.42
SNF8-206ENST00000509989 EIF3LQ9Y262 564 aaKnown RBP12.4□□□□□ -0.42
SNF8-206ENST00000509989 A0A1W2PRB8 838 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 ANKRD33BA6NCL7 494 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 ACOX3O15254 700 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 SCN2BO60939 215 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 BCAS2O75934 225 aaPredicted RBP12.39□□□□□ -0.43
SNF8-206ENST00000509989 IGHG3P01860 377 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 TPOP07202 933 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 CD1EP15812 388 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 NAGAP17050 411 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 LBPP18428 481 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 PTPN6P29350 595 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 PTGS2P35354 604 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 RFX3P48380 749 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 RNF144AP50876 292 aaPredicted RBP12.39□□□□□ -0.43
SNF8-206ENST00000509989 DGKQP52824 942 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 CASP9P55211 416 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 HBA1P69905 142 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 DUSP5Q16690 384 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 EIPR1Q53HC9 387 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 DCST1Q5T197 706 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 CCNJQ5T5M9 372 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 ANGPTL8Q6UXH0 198 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 APOOLQ6UXV4 268 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 SLC22A16Q86VW1 577 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 ANKRD46Q86W74 232 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 FAM57AQ8TBR7 257 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 HOXB13Q92826 284 aaPredicted RBP12.39□□□□□ -0.43
SNF8-206ENST00000509989 ZBED6CLQ96FA7 236 aaPredicted RBP12.39□□□□□ -0.43
SNF8-206ENST00000509989 DUSP26Q9BV47 211 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 OSBPL11Q9BXB4 747 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 UBQLN3Q9H347 655 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 METTL7AQ9H8H3 244 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 SERHLQ9NQF3 203 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 NOP53Q9NZM5 478 aaKnown RBP12.39□□□□□ -0.43
SNF8-206ENST00000509989 NTMQ9P121 344 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 FBXL2Q9UKC9 423 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 CBLCQ9ULV8 474 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 MEMO1Q9Y316 297 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 SLC6A5Q9Y345 797 aa12.39□□□□□ -0.43
SNF8-206ENST00000509989 HEATR5AQ86XA9 2040 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 A0A1B0GVC2 190 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 PRAMEF25A6NGN4 478 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 OR6C70A6NIJ9 312 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 CAPN14A8MX76 684 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 ACOT7O00154 380 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 HDAC3O15379 428 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 EMC8O43402 210 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 SCO2O43819 266 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 FADS1O60427 444 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 COQ9O75208 318 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 NKX2-2O95096 273 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 PRPS1L1P21108 318 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 TCEA1P23193 301 aaKnown RBP12.38□□□□□ -0.43
SNF8-206ENST00000509989 GDF1P27539 372 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 GRNP28799 593 aaKnown RBP12.38□□□□□ -0.43
SNF8-206ENST00000509989 ZFP36L2P47974 494 aaKnown RBP12.38□□□□□ -0.43
SNF8-206ENST00000509989 TMED10P49755 219 aaKnown RBP12.38□□□□□ -0.43
SNF8-206ENST00000509989 C21orf58P58505 322 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 RPS26P62854 115 aaKnown RBP12.38□□□□□ -0.43
SNF8-206ENST00000509989 SLC10A1Q14973 349 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 GXYLT1Q4G148 440 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 SPANXN4Q5MJ08 99 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 WIPI1Q5MNZ9 446 aaPredicted RBP12.38□□□□□ -0.43
SNF8-206ENST00000509989 RTL6Q6ICC9 239 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 MFSD12Q6NUT3 480 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 FIGNL1Q6PIW4 674 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 R3HCC1LQ7Z5L2 792 aaKnown RBP12.38□□□□□ -0.43
SNF8-206ENST00000509989 YRDCQ86U90 279 aaKnown RBP12.38□□□□□ -0.43
SNF8-206ENST00000509989 DND1Q8IYX4 353 aaKnown RBP12.38□□□□□ -0.43
SNF8-206ENST00000509989 ITLN2Q8WWU7 325 aaPredicted RBP12.38□□□□□ -0.43
SNF8-206ENST00000509989 SLC9A6Q92581 669 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 RMND5BQ96G75 393 aaPredicted RBP12.38□□□□□ -0.43
SNF8-206ENST00000509989 TMEM41AQ96HV5 264 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 ZNF597Q96LX8 424 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 DMRTA2Q96SC8 542 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 VIPAS39Q9H9C1 493 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 AIG1Q9NVV5 245 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 KLRF1Q9NZS2 232 aa12.38□□□□□ -0.43
SNF8-206ENST00000509989 PLEKHB1Q9UF11 243 aaPredicted RBP12.38□□□□□ -0.43
SNF8-206ENST00000509989 BOKQ9UMX3 212 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms