RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 ZNF572Q7Z3I7 529 aaPredicted RBP14.36□□□□□ -0.11
RAB40C-202ENST00000509637 GRAMD2AQ8IUY3 354 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 OR2M3Q8NG83 312 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 APIPQ96GX9 242 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 ZNF845Q96IR2 970 aaPredicted RBP14.36□□□□□ -0.11
RAB40C-202ENST00000509637 Q96MF0 132 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 SFXN2Q96NB2 322 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 NPAS1Q99742 590 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 KLHDC3Q9BQ90 382 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 C1QTNF3Q9BXJ4 246 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 PIGMQ9H3S5 423 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 DSN1Q9H410 356 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 ELOVL6Q9H5J4 265 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 ZNF395Q9H8N7 513 aaPredicted RBP14.36□□□□□ -0.11
RAB40C-202ENST00000509637 FOLH1BQ9HBA9 442 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 ADAM21Q9UKJ8 722 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 UTS2RQ9UKP6 389 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 CFL2Q9Y281 166 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 ZNF337Q9Y3M9 751 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 ANK3Q12955 4377 aaKnown RBP14.36□□□□□ -0.11
RAB40C-202ENST00000509637 FADS1O60427 444 aa14.35□□□□□ -0.11
RAB40C-202ENST00000509637 THBDP07204 575 aa14.35□□□□□ -0.11
RAB40C-202ENST00000509637 CHMP24386 653 aa14.35□□□□□ -0.11
RAB40C-202ENST00000509637 DPP4P27487 766 aa14.35□□□□□ -0.11
RAB40C-202ENST00000509637 CPOXP36551 454 aa14.35□□□□□ -0.11
RAB40C-202ENST00000509637 CLDN20P56880 219 aa14.35□□□□□ -0.11
RAB40C-202ENST00000509637 ANKRD34AQ69YU3 496 aa14.35□□□□□ -0.11
RAB40C-202ENST00000509637 SCIMPQ6UWF3 145 aa14.35□□□□□ -0.11
RAB40C-202ENST00000509637 LARP4Q71RC2 724 aaKnown RBP eCLIP14.35□□□□□ -0.11
RAB40C-202ENST00000509637 ZNF610Q8N9Z0 462 aa14.35□□□□□ -0.11
RAB40C-202ENST00000509637 DCAKDQ8WVC6 231 aa14.35□□□□□ -0.11
RAB40C-202ENST00000509637 EXOSC8Q96B26 276 aaKnown RBP14.35□□□□□ -0.11
RAB40C-202ENST00000509637 PIK3IP1Q96FE7 263 aa14.35□□□□□ -0.11
RAB40C-202ENST00000509637 ACPTQ9BZG2 426 aa14.35□□□□□ -0.11
RAB40C-202ENST00000509637 BRF2Q9HAW0 419 aa14.35□□□□□ -0.11
RAB40C-202ENST00000509637 MED11Q9P086 117 aa14.35□□□□□ -0.11
RAB40C-202ENST00000509637 PRODH2Q9UF12 536 aa14.35□□□□□ -0.11
RAB40C-202ENST00000509637 RTTNQ86VV8 2226 aa14.35□□□□□ -0.11
RAB40C-202ENST00000509637 SHISA8B8ZZ34 492 aa14.34□□□□□ -0.11
RAB40C-202ENST00000509637 SMAD7O15105 426 aaKnown RBP14.34□□□□□ -0.11
RAB40C-202ENST00000509637 SMNDC1O75940 238 aaKnown RBP eCLIP14.34□□□□□ -0.11
RAB40C-202ENST00000509637 CRYGSP22914 178 aa14.34□□□□□ -0.11
RAB40C-202ENST00000509637 GCAP28676 217 aa14.34□□□□□ -0.11
RAB40C-202ENST00000509637 CD79BP40259 229 aa14.34□□□□□ -0.11
RAB40C-202ENST00000509637 MC3RP41968 323 aa14.34□□□□□ -0.11
RAB40C-202ENST00000509637 TRA2BP62995 288 aaKnown RBP14.34□□□□□ -0.11
RAB40C-202ENST00000509637 SIRPAP78324 504 aa14.34□□□□□ -0.11
RAB40C-202ENST00000509637 CAPRIN1Q14444 709 aaKnown RBP14.34□□□□□ -0.11
RAB40C-202ENST00000509637 BCL2A1Q16548 175 aa14.34□□□□□ -0.11
RAB40C-202ENST00000509637 C6orf163Q5TEZ5 329 aa14.34□□□□□ -0.11
RAB40C-202ENST00000509637 APOOLQ6UXV4 268 aa14.34□□□□□ -0.11
RAB40C-202ENST00000509637 SLC44A2Q8IWA5 706 aaPredicted RBP14.34□□□□□ -0.11
RAB40C-202ENST00000509637 UBQLNLQ8IYU4 475 aa14.34□□□□□ -0.11
RAB40C-202ENST00000509637 CDYL2Q8N8U2 506 aa14.34□□□□□ -0.11
RAB40C-202ENST00000509637 UHMK1Q8TAS1 419 aaKnown RBP14.34□□□□□ -0.11
RAB40C-202ENST00000509637 C16orf78Q8WTQ4 265 aa14.34□□□□□ -0.11
RAB40C-202ENST00000509637 TMCO6Q96DC7 493 aa14.34□□□□□ -0.11
RAB40C-202ENST00000509637 PGM2Q96G03 612 aa14.34□□□□□ -0.11
RAB40C-202ENST00000509637 PIP5K1AQ99755 562 aa14.34□□□□□ -0.11
RAB40C-202ENST00000509637 RAB17Q9H0T7 212 aa14.34□□□□□ -0.11
RAB40C-202ENST00000509637 CDC42EP4Q9H3Q1 356 aaKnown RBP14.34□□□□□ -0.11
RAB40C-202ENST00000509637 TMEM216Q9P0N5 145 aa14.34□□□□□ -0.11
RAB40C-202ENST00000509637 VPS29Q9UBQ0 182 aa14.34□□□□□ -0.11
RAB40C-202ENST00000509637 DMGDHQ9UI17 866 aaKnown RBP14.34□□□□□ -0.11
RAB40C-202ENST00000509637 TRIM49D1C9J1S8 452 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 CASKO14936 926 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 SCO2O43819 266 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 DLX3O60479 287 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 AQP8O94778 261 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 PLAUP00749 431 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 PCSK6P29122 969 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 ECHS1P30084 290 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 UGT2B10P36537 528 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 SLC6A8P48029 635 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 PCYT1AP49585 367 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 PNLIPRP2P54317 469 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 CLCQ05315 142 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 GAB1Q13480 694 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 ACKR1Q16570 336 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 SYT10Q6XYQ8 523 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 RELL1Q8IUW5 271 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 LRRC75A-AS1Q8N1F1 130 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 CNEP1R1Q8N9A8 125 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 FNDC9Q8TBE3 224 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 KCNA7Q96RP8 456 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 PAFAH2Q99487 392 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 MRPL57Q9BQC6 102 aaKnown RBP14.33□□□□□ -0.12
RAB40C-202ENST00000509637 MCM8Q9UJA3 840 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 DKKL1Q9UK85 242 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 TIMM22Q9Y584 194 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 ZNF780BQ9Y6R6 833 aa14.33□□□□□ -0.12
RAB40C-202ENST00000509637 OR2M5A3KFT3 312 aa14.32□□□□□ -0.12
RAB40C-202ENST00000509637 SLC22A20A6NK97 555 aa14.32□□□□□ -0.12
RAB40C-202ENST00000509637 KLF4O43474 513 aa14.32□□□□□ -0.12
RAB40C-202ENST00000509637 PLOD3O60568 738 aa14.32□□□□□ -0.12
RAB40C-202ENST00000509637 SMPD2O60906 423 aa14.32□□□□□ -0.12
RAB40C-202ENST00000509637 SMIM24O75264 130 aa14.32□□□□□ -0.12
RAB40C-202ENST00000509637 GUCY1B2O75343 617 aa14.32□□□□□ -0.12
RAB40C-202ENST00000509637 OTCP00480 354 aa14.32□□□□□ -0.12
RAB40C-202ENST00000509637 IGKV1D-16P01601 117 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms