RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 DPYSL5Q9BPU6 564 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 DPH1Q9BZG8 443 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 VIPAS39Q9H9C1 493 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 CPNE5Q9HCH3 593 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 MKKSQ9NPJ1 570 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 TAS2R16Q9NYV7 291 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SLC7A8Q9UHI5 535 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 ADAM18Q9Y3Q7 739 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 COL4A4P53420 1690 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 ELOA3CA0A087WX78 387 aaPredicted RBP3.68□□□□□ -1.82
NEDD4-209ENST00000508871 LOC390937A0A1W2PQ73 354 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 SIAH2O43255 324 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 PLRG1O43660 514 aaKnown RBP3.68□□□□□ -1.82
NEDD4-209ENST00000508871 CKMT2P17540 419 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 CAPN2P17655 700 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 UBA1P22314 1058 aaKnown RBP3.68□□□□□ -1.82
NEDD4-209ENST00000508871 RYKP34925 604 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 PTGER1P34995 402 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 SLC1A1P43005 524 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 RPL15P61313 204 aaKnown RBP3.68□□□□□ -1.82
NEDD4-209ENST00000508871 UBE2IP63279 158 aaKnown RBP3.68□□□□□ -1.82
NEDD4-209ENST00000508871 MRPS22P82650 360 aaKnown RBP3.68□□□□□ -1.82
NEDD4-209ENST00000508871 SLC9A3R2Q15599 337 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 TRIP13Q15645 432 aaPredicted RBP3.68□□□□□ -1.82
NEDD4-209ENST00000508871 PPP1R3AQ16821 1122 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 EMC10Q5UCC4 262 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 PLPP4Q5VZY2 271 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 KIAA0895LQ68EN5 471 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 SLC39A5Q6ZMH5 540 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 ACOT7LQ6ZUV0 252 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 COX15Q7KZN9 410 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 DAW1Q8N136 415 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 GALNT4Q8N4A0 578 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 JAGN1Q8N5M9 183 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 LINC01465Q8N7H1 131 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 ABHD11Q8NFV4 315 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 COX4I2Q96KJ9 171 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 KCNK15Q9H427 330 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 FBXO44Q9H4M3 255 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 PRDM12Q9H4Q4 367 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 PCMTD2Q9NV79 361 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 RBPJLQ9UBG7 517 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 ACSL5Q9ULC5 683 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 TRAV18A0A075B6X5 111 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 A0A1B0GTW7 788 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 TMEM150CB9EJG8 249 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 EIF3HO15372 352 aaKnown RBP eCLIP3.68□□□□□ -1.82
NEDD4-209ENST00000508871 SLC16A7O60669 478 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 CNIH1O95406 144 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 TFP02787 698 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 CELA3BP08861 270 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 TIMP2P16035 220 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 TPSB2P20231 275 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 GLRA1P23415 457 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 BDKRB2P30411 391 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 MMP12P39900 470 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 KHKP50053 298 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 SCNN1GP51170 649 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 NDST2P52849 883 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 SLC37A1P57057 533 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 S100A12P80511 92 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 CYP24A1Q07973 514 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 MFSD13AQ14CX5 517 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 TPSAB1Q15661 275 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 EFHC1Q5JVL4 640 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 SFRP4Q6FHJ7 346 aaPredicted RBP3.68□□□□□ -1.82
NEDD4-209ENST00000508871 MPZL3Q6UWV2 235 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 C12orf54Q6X4T0 127 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 TMPRSS7Q7RTY8 843 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 CHSY1Q86X52 802 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 OR5M8Q8NGP6 311 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 OR1J2Q8NGS2 313 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 OR2T34Q8NGX1 318 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 ATL1Q8WXF7 558 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 SLC35C1Q96A29 364 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 FBXL8Q96CD0 374 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 SH3YL1Q96HL8 342 aaPredicted RBP3.68□□□□□ -1.82
NEDD4-209ENST00000508871 SYT11Q9BT88 431 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 TMEM208Q9BTX3 173 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 TRIM15Q9C019 465 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 S1PR5Q9H228 398 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 GCM1Q9NP62 436 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 HMG20AQ9NP66 347 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 ASB6Q9NWX5 421 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 STARD13Q9Y3M8 1113 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 ETV7Q9Y603 341 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 CCDC195A0A1B0GUA6 201 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 USP27XA6NNY8 438 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 HAS3O00219 553 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 HMGN1P05114 100 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 ATF1P18846 271 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 CD58P19256 250 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 PROZP22891 400 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 SLC6A4P31645 630 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 CDAP32320 146 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 CRATP43155 626 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 CRYBB1P53674 252 aaPredicted RBP3.68□□□□□ -1.82
NEDD4-209ENST00000508871 WNT3P56703 355 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 GSCP56915 257 aaPredicted RBP3.68□□□□□ -1.82
NEDD4-209ENST00000508871 DBPQ10586 325 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms