RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 A0A1B0GWJ7 208 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 LRRC72A6NJI9 287 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 RHPN2P1A8MT19 583 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 ARHGEF33A8MVX0 844 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 B4DXG7 233 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 PTGES3LE9PB15 166 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 G3V2L1 256 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 M0R233 179 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 FPGTO14772 594 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 PHYHO14832 338 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 TO15178 435 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 GRID2O43424 1007 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 MPZL2O60487 215 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 CLN5O75503 358 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 SCELO95171 688 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 SERPINA1P01009 418 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 GH2P01242 217 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 HLA-DQB1P01920 261 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 WNT1P04628 370 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 APRTP07741 180 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 ANXA6P08133 673 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 CYP3A4P08684 503 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 HPGDP15428 266 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 HOXB8P17481 243 aaPredicted RBP4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 SPI1P17947 270 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 CYP2B6P20813 491 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 RPS3P23396 243 aaKnown RBP eCLIP4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 MST1P26927 711 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 STOMP27105 288 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 CCND3P30281 292 aaPredicted RBP4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 FMO4P31512 558 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 CA5AP35218 305 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 TSPAN7P41732 249 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 DPP6P42658 865 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 ATP5OP48047 213 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 GCLMP48507 274 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 CLCN5P51795 746 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 NR0B1P51843 470 aaKnown RBP4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 TKTL1P51854 596 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 ACLYP53396 1101 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 RAG2P55895 527 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 NCS1P62166 190 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 IL5RAQ01344 420 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 POU5F1BQ06416 359 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 CD47Q08722 323 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 SPP2Q13103 211 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 BTN1A1Q13410 526 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 CAPRIN1Q14444 709 aaKnown RBP4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 DMC1Q14565 340 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 RPS6KA2Q15349 733 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 PFKFB4Q16877 469 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 TATDN3Q17R31 274 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 TIGD6Q17RP2 521 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 EIF2S3LQ2VIR3 472 aaKnown RBP4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 GTDC1Q4AE62 458 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 ATP13A5Q4VNC0 1218 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 C2CD6Q53TS8 623 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 ARL13AQ5H913 290 aaPredicted RBP4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 CDKL4Q5MAI5 379 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 DDI2Q5TDH0 399 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 TMEM236Q5W0B7 351 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 JADE1Q6IE81 842 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 ANKRD54Q6NXT1 300 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 TATDN1Q6P1N9 297 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 SCYL2Q6P3W7 929 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 FUT10Q6P4F1 479 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 ERICH5Q6P6B1 374 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 KLHL17Q6TDP4 642 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 C5orf46Q6UWT4 87 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 CFAP77Q6ZQR2 320 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 RTL4Q6ZR62 310 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 RASSF6Q6ZTQ3 369 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 SLC26A9Q7LBE3 791 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 SPATA19Q7Z5L4 167 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 ADGRD2Q7Z7M1 963 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 TMEM17Q86X19 198 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 NAXDQ8IW45 347 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 LAS2Q8IYD9 372 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 PLD5Q8N7P1 536 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 CLDN22Q8N7P3 220 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 ZNF565Q8N9K5 539 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 ATG16L2Q8NAA4 619 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 GLIS1Q8NBF1 620 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 SLC37A3Q8NCC5 494 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 ZNF540Q8NDQ6 660 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 OR52H1Q8NGJ2 320 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 FBXO30Q8TB52 745 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 ASB13Q8WXK3 278 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 OVCA2Q8WZ82 227 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 CPNE4Q96A23 557 aaPredicted RBP4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 RAB7BQ96AH8 199 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 BIRC7Q96CA5 298 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 LRRC58Q96CX6 371 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 LMLNQ96KR4 655 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 COL21A1Q96P44 957 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 TRNT1Q96Q11 434 aaKnown RBP4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 PIGSQ96S52 555 aa4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 PARK7Q99497 189 aaKnown RBP4.28□□□□□ -1.72
PDLIM5-211ENST00000508531 RIT2Q99578 217 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms