RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 PLXNA1Q9UIW2 1896 aa3.61□□□□□ -1.83
TOPBP1-206ENST00000508524 EPOPA6NHQ4 379 aa3.61□□□□□ -1.83
TOPBP1-206ENST00000508524 CHUKO15111 745 aa3.61□□□□□ -1.83
TOPBP1-206ENST00000508524 ANXA9O76027 345 aa3.61□□□□□ -1.83
TOPBP1-206ENST00000508524 PRB2P02812 416 aaPredicted RBP3.61□□□□□ -1.83
TOPBP1-206ENST00000508524 PPP2R1BP30154 601 aa3.61□□□□□ -1.83
TOPBP1-206ENST00000508524 FNTAP49354 379 aa3.61□□□□□ -1.83
TOPBP1-206ENST00000508524 SLC25A1P53007 311 aa3.61□□□□□ -1.83
TOPBP1-206ENST00000508524 EMC2Q15006 297 aa3.61□□□□□ -1.83
TOPBP1-206ENST00000508524 ACKR1Q16570 336 aa3.61□□□□□ -1.83
TOPBP1-206ENST00000508524 CNPY1Q3B7I2 92 aa3.61□□□□□ -1.83
TOPBP1-206ENST00000508524 C9orf129Q5T035 196 aaKnown RBP3.61□□□□□ -1.83
TOPBP1-206ENST00000508524 KLHDC8AQ8IYD2 350 aa3.61□□□□□ -1.83
TOPBP1-206ENST00000508524 ST6GALNAC5Q9BVH7 336 aa3.61□□□□□ -1.83
TOPBP1-206ENST00000508524 WWP1Q9H0M0 922 aa3.61□□□□□ -1.83
TOPBP1-206ENST00000508524 TUFT1Q9NNX1 390 aa3.61□□□□□ -1.83
TOPBP1-206ENST00000508524 PLEKHA6Q9Y2H5 1048 aa3.61□□□□□ -1.83
TOPBP1-206ENST00000508524 AK9Q5TCS8 1911 aa3.61□□□□□ -1.83
TOPBP1-206ENST00000508524 LOC400499M0QZD8 3231 aa3.61□□□□□ -1.83
TOPBP1-206ENST00000508524 SPEF2Q9C093 1822 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 RLFQ13129 1914 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 NME6O75414 186 aaPredicted RBP3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 RAD51DO75771 328 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 HSD17B1P14061 328 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 FRKP42685 505 aaPredicted RBP3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 MAGEB1P43366 347 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 HLCSP50747 726 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 GABPAQ06546 454 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 PTK6Q13882 451 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 TAF7Q15545 349 aaPredicted RBP3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 PPP1R3AQ16821 1122 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 UNC50Q53HI1 259 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 UBQLNLQ8IYU4 475 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 ARL14Q8N4G2 192 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 ICA1LQ8NDH6 482 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 ZNF671Q8TAW3 534 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 GOLGA5Q8TBA6 731 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 DEPDC1BQ8WUY9 529 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 PRCCQ92733 491 aaPredicted RBP3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 MAPKAP1Q9BPZ7 522 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 MLPHQ9BV36 600 aaPredicted RBP3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 COA1Q9GZY4 146 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 PSORS1C1Q9UIG5 152 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 MOKQ9UQ07 419 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 PLXNA3P51805 1871 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 IGF2RP11717 2491 aa3.6□□□□□ -1.83
TOPBP1-206ENST00000508524 SMG1Q96Q15 3661 aaKnown RBP3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 A0A0G2JMZ2 1700 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 IGHV3OR16-12A0A075B7B8 117 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 IGHV3-35A0A0C4DH35 117 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 OOEPA6NGQ2 149 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 CCT8L1PA6NM43 557 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 TNFSF11O14788 317 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 ATP9AO75110 1047 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 HSPA4LO95757 839 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 P0C879 139 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 EZRP15311 586 aaKnown RBP3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 EIF2S2P20042 333 aaKnown RBP3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 CYP2B6P20813 491 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 ERVPABLB-1P60509 514 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 OR1C1Q15619 314 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 WSCD2Q2TBF2 565 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 ODF2Q5BJF6 829 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 GCNT7Q6ZNI0 430 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 Q6ZRG5 221 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 MSANTD1Q6ZTZ1 278 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 ASCL5Q7RTU5 278 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 ITIH5Q86UX2 942 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 TRPV1Q8NER1 839 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 TRPV3Q8NET8 790 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 VN1R17PQ8TDU5 208 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 SNRNP40Q96DI7 357 aaKnown RBP3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 CCT8L2Q96SF2 557 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 S1PR3Q99500 378 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 ACPTQ9BZG2 426 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 CD209Q9NNX6 404 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 SENP1Q9P0U3 644 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 VPS18Q9P253 973 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 EIF3KQ9UBQ5 218 aaKnown RBP3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 CDH7Q9ULB5 785 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 PTPRFP10586 1907 aa3.59□□□□□ -1.83
TOPBP1-206ENST00000508524 PHIPQ8WWQ0 1821 aa3.58□□□□□ -1.84
TOPBP1-206ENST00000508524 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.58□□□□□ -1.84
TOPBP1-206ENST00000508524 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.58□□□□□ -1.84
TOPBP1-206ENST00000508524 SDR42E2A6NKP2 422 aa3.58□□□□□ -1.84
TOPBP1-206ENST00000508524 HMGB1P1B2RPK0 211 aaPredicted RBP3.58□□□□□ -1.84
TOPBP1-206ENST00000508524 SCG2P13521 617 aa3.58□□□□□ -1.84
TOPBP1-206ENST00000508524 PGAM2P15259 253 aa3.58□□□□□ -1.84
TOPBP1-206ENST00000508524 ELK1P19419 428 aa3.58□□□□□ -1.84
TOPBP1-206ENST00000508524 SLC34A1Q06495 639 aa3.58□□□□□ -1.84
TOPBP1-206ENST00000508524 SHQ1Q6PI26 577 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-206ENST00000508524 OTOAQ7RTW8 1153 aa3.58□□□□□ -1.84
TOPBP1-206ENST00000508524 SIAH3Q8IW03 269 aa3.58□□□□□ -1.84
TOPBP1-206ENST00000508524 AGPAT1Q99943 283 aa3.58□□□□□ -1.84
TOPBP1-206ENST00000508524 THUMPD3Q9BV44 507 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-206ENST00000508524 ZDHHC6Q9H6R6 413 aa3.58□□□□□ -1.84
TOPBP1-206ENST00000508524 ELL3Q9HB65 397 aaPredicted RBP3.58□□□□□ -1.84
TOPBP1-206ENST00000508524 TAS2R16Q9NYV7 291 aa3.58□□□□□ -1.84
TOPBP1-206ENST00000508524 TECRQ9NZ01 308 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-206ENST00000508524 MTCH2Q9Y6C9 303 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms