RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 HEY2Q9UBP5 337 aa7.28□□□□□ -1.24
UBE2D3-222ENST00000508238 PRODH2Q9UF12 536 aa7.28□□□□□ -1.24
UBE2D3-222ENST00000508238 TBK1Q9UHD2 729 aa7.28□□□□□ -1.24
UBE2D3-222ENST00000508238 UTS2RQ9UKP6 389 aa7.28□□□□□ -1.24
UBE2D3-222ENST00000508238 GRID1Q9ULK0 1009 aa7.28□□□□□ -1.24
UBE2D3-222ENST00000508238 DLGAP4Q9Y2H0 992 aa7.28□□□□□ -1.24
UBE2D3-222ENST00000508238 GPR55Q9Y2T6 319 aaPredicted RBP7.28□□□□□ -1.24
UBE2D3-222ENST00000508238 GNG14A0A1W2PPG7 69 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 AHRRA9YTQ3 701 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 NPIPB8E9PQR5 432 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 PCDH7O60245 1069 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 PLOD3O60568 738 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 PLIN3O60664 434 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 SHBGP04278 402 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 IL3P08700 152 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 MYL2P10916 166 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 CAPN3P20807 821 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 ELAVL4P26378 380 aaKnown RBP7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 TIA1P31483 386 aaKnown RBP eCLIP7.27□□□□□ -1.253e-7■□□□□ 10
UBE2D3-222ENST00000508238 MPIP34949 423 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 HTR6P50406 440 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 CDK9P50750 372 aaKnown RBP7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 NAGLUP54802 743 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 HMGCS1Q01581 520 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 DUSP2Q05923 314 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 TRMT12Q53H54 448 aaKnown RBP7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 ZNF628Q5EBL2 1059 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 NHSL2Q5HYW2 709 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 C1orf185Q5T7R7 199 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 WLSQ5T9L3 541 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 TIGD3Q6B0B8 471 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 CDPF1Q6NVV7 123 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 SLC30A6Q6NXT4 461 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 ZNF585AQ6P3V2 769 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 FRMD7Q6ZUT3 714 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 LRRN4CLQ8ND94 238 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 ADCY4Q8NFM4 1077 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 OR5M9Q8NGP3 310 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 C16orf78Q8WTQ4 265 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 HGDQ93099 445 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 APIPQ96GX9 242 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 ZNF597Q96LX8 424 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 RILPQ96NA2 401 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 BTBD9Q96Q07 612 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 BRINP2Q9C0B6 783 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 STMN4Q9H169 189 aaPredicted RBP7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 MID1IP1Q9NPA3 183 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 OXSMQ9NWU1 459 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 SPRR3Q9UBC9 169 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 DTX4Q9Y2E6 619 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 C15orf41Q9Y2V0 281 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 POLR3KQ9Y2Y1 108 aaPredicted RBP7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 PLLPQ9Y342 182 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 TIMM22Q9Y584 194 aa7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 PRRC2AP48634 2157 aaKnown RBP7.27□□□□□ -1.25
UBE2D3-222ENST00000508238 CSMD2Q7Z408 3487 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 A0A087WV62 115 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 A0A0G2JNJ9 132 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 FRG2CA6NGY1 282 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 OR6C70A6NIJ9 312 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 FOXO6A8MYZ6 492 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 MYO1GB0I1T2 1018 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 SLITRK5O94991 958 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 EPPINO95925 133 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 TUBBP07437 444 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 SNRPB2P08579 225 aaKnown RBP7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 ANXA4P09525 319 aaPredicted RBP7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 IFI6P09912 130 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 CT45A8P0DMV1 189 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 CT45A9P0DMV2 189 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 CPA3P15088 417 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 KRT15P19012 456 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 KRT4P19013 534 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 RAB6AP20340 208 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 DDCP20711 480 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 PRPH2P23942 346 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 PTPN6P29350 595 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 ZFP36L2P47974 494 aaKnown RBP7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 ALDH9A1P49189 494 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 FOXA1P55317 472 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 MRPS35P82673 323 aaKnown RBP7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 SLC18A2Q05940 514 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 CRYZQ08257 329 aaKnown RBP7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 EXOSC7Q15024 291 aaKnown RBP7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 KIAA0040Q15053 153 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 SF3B4Q15427 424 aaKnown RBP eCLIP7.26□□□□□ -1.253e-70■■■■■ 60.5
UBE2D3-222ENST00000508238 LTB4RQ15722 352 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 SLC25A35Q3KQZ1 300 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 CT45A2Q5DJT8 189 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 RIPPLY2Q5TAB7 128 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 ZBTB37Q5TC79 503 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 FAM219BQ5XKK7 198 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 BICRALQ6AI39 1079 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 VASNQ6EMK4 673 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 MEX3BQ6ZN04 569 aaKnown RBP7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 RNF165Q6ZSG1 346 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 IKBIPQ70UQ0 350 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 CCDC71Q8IV32 467 aaPredicted RBP7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 ULK2Q8IYT8 1036 aa7.26□□□□□ -1.25
UBE2D3-222ENST00000508238 CCNYL1Q8N7R7 359 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms