RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 TMEM239Q8WW34 195 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 PIH1D2Q8WWB5 315 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 FCAMRQ8WWV6 532 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 HTR3CQ8WXA8 447 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 SORCS1Q8WY21 1168 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 OSTF1Q92882 214 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 IGSF8Q969P0 613 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 ASB9Q96DX5 294 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 METTL2AQ96IZ6 378 aaKnown RBP3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 LRR1Q96L50 414 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 TGM7Q96PF1 710 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 OR6C1Q96RD1 312 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 ACOX2Q99424 681 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 RIT2Q99578 217 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 CGREF1Q99674 301 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 PAPOLGQ9BWT3 736 aaKnown RBP3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 RBM24Q9BX46 236 aaKnown RBP3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 PRRG3Q9BZD7 231 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 SRRQ9GZT4 340 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 UPF3AQ9H1J1 476 aaKnown RBP3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 OPN3Q9H1Y3 402 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 PIGMQ9H3S5 423 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 FAM124BQ9H5Z6 455 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 ZDHHC6Q9H6R6 413 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 ASB8Q9H765 288 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 TBC1D17Q9HA65 648 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 C12orf10Q9HB07 376 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 LPAR2Q9HBW0 351 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 SLC40A1Q9NP59 571 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 GSN-AS1Q9NRJ2 163 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 ELOVL2Q9NXB9 296 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 AHSPQ9NZD4 102 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 NLKQ9UBE8 527 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 P2RX2Q9UBL9 471 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 GAGE2DQ9UEU5 116 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 SLC12A6Q9UHW9 1150 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 B9D1Q9UPM9 204 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 DTX4Q9Y2E6 619 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 RBMX2Q9Y388 322 aaKnown RBP3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 KLF2Q9Y5W3 355 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 CLIC4Q9Y696 253 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 SAR1BQ9Y6B6 198 aa3.31□□□□□ -1.88
HMGB3P15-201ENST00000507326 ABCC8Q09428 1581 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 PNPLA6Q8IY17 1366 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 TRAV24A0A0B4J272 114 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 TMEM213A2RRL7 107 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 TMEM8BA6NDV4 472 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 FRG2CA6NGY1 282 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 CYSRT1A8MQ03 144 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 FAM157AC9JC47 383 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 SGK494L7N484 410 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 PDLIM1O00151 329 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 PGRMC1O00264 195 aaKnown RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 GPR171O14626 319 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 RAB29O14966 203 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 CFLARO15519 480 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 HSPA12AO43301 675 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 XRCC3O43542 346 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 SLC28A2O43868 658 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 SNX3O60493 162 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 SCN2BO60939 215 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 CNOT3O75175 753 aaKnown RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 CREG1O75629 220 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 OR2F2O95006 317 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 NDUFA7O95182 113 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 CLDN9O95484 217 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 APOEP02649 317 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 CSN3P07498 182 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 RPS17P08708 135 aaKnown RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 F7P08709 466 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 IRF2P14316 349 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 CHATP28329 748 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 HNRNPH3P31942 346 aaKnown RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 SLC26A3P40879 764 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 P2RY2P41231 377 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 ACADSBP45954 432 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 BRCC3P46736 316 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 RPL21P46778 160 aaKnown RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 NPBWR2P48146 333 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 ARRB1P49407 418 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 TUFMP49411 452 aaKnown RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 STK19P49842 368 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 ACLYP53396 1101 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 EMP2P54851 167 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 CLDN2P57739 230 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 HNRNPKP61978 463 aaKnown RBP eCLIP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 PPIAP62937 165 aaKnown RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 CDKL1Q00532 357 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 RFTN1Q14699 578 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 SLC17A1Q14916 467 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 SPCS2Q15005 226 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 EXT1Q16394 746 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 PTGISQ16647 500 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 MICBQ29980 383 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 CTU2Q2VPK5 515 aaKnown RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 SLC9C1Q4G0N8 1177 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 LACTB2Q53H82 288 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 C2CD6Q53TS8 623 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 C5orf47Q569G3 176 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 ARMCX4Q5H9R4 360 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms