RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 RASL10BQ96S79 203 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 YIPF4Q9BSR8 244 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 LMF2Q9BU23 707 aaKnown RBP9.26□□□□□ -0.93
NUP54-203ENST00000504173 NXF5Q9H1B4 397 aaKnown RBP9.26□□□□□ -0.93
NUP54-203ENST00000504173 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.26□□□□□ -0.93
NUP54-203ENST00000504173 FAF1Q9UNN5 650 aaPredicted RBP9.26□□□□□ -0.93
NUP54-203ENST00000504173 TP53TG5Q9Y2B4 290 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 GPR55Q9Y2T6 319 aaPredicted RBP9.26□□□□□ -0.93
NUP54-203ENST00000504173 OR10H1Q9Y4A9 318 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 ZNF451Q9Y4E5 1061 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 PCDHGB7Q9Y5F8 929 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 TTC36A6NLP5 189 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 ACOX3O15254 700 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 NADKO95544 446 aaPredicted RBP9.25□□□□□ -0.93
NUP54-203ENST00000504173 KRT75O95678 551 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 WDPCPO95876 746 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 F10P00742 488 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 PDGFAP04085 211 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 ALOX5P09917 674 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 ZCCHC18P0CG32 403 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 COX4I1P13073 169 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 DRD5P21918 477 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 MATN1P21941 496 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 GABRA3P34903 492 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 SOX3P41225 446 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 ST13P50502 369 aaKnown RBP9.25□□□□□ -0.93
NUP54-203ENST00000504173 RPS26P62854 115 aaKnown RBP9.25□□□□□ -0.93
NUP54-203ENST00000504173 PSPHP78330 225 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 PSG6Q00889 435 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 OC90Q02509 493 aaPredicted RBP9.25□□□□□ -0.93
NUP54-203ENST00000504173 STX5Q13190 355 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 NFYCQ13952 458 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 COQ5Q5HYK3 327 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 SAXO2Q658L1 398 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 REP15Q6BDI9 236 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 CDC73Q6P1J9 531 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 ZCCHC12Q6PEW1 402 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 OPN5Q6U736 354 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 IGFL2Q6UWQ7 119 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 NPSR1Q6W5P4 371 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 DHDDSQ86SQ9 333 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 RETREG3Q86VR2 466 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 TREML1Q86YW5 311 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 SLC44A2Q8IWA5 706 aaPredicted RBP9.25□□□□□ -0.93
NUP54-203ENST00000504173 PRR22Q8IZ63 422 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 ZADH2Q8N4Q0 377 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 SLC15A4Q8N697 577 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 DNAJB8Q8NHS0 232 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 RP9Q8TA86 221 aaKnown RBP9.25□□□□□ -0.93
NUP54-203ENST00000504173 CPT1CQ8TCG5 803 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 PNPT1Q8TCS8 783 aaKnown RBP9.25□□□□□ -0.93
NUP54-203ENST00000504173 GPR151Q8TDV0 419 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 NEURL3Q96EH8 262 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 HSPBAP1Q96EW2 488 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 OTUB1Q96FW1 271 aaPredicted RBP9.25□□□□□ -0.93
NUP54-203ENST00000504173 C16orf58Q96GQ5 468 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 UTP23Q9BRU9 249 aaKnown RBP9.25□□□□□ -0.93
NUP54-203ENST00000504173 ACTRT3Q9BYD9 372 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 PAIP1Q9H074 479 aaKnown RBP9.25□□□□□ -0.93
NUP54-203ENST00000504173 ZBTB20Q9HC78 741 aaPredicted RBP9.25□□□□□ -0.93
NUP54-203ENST00000504173 Q9N2J8 555 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 SLC6A13Q9NSD5 602 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 GPATCH2Q9NW75 528 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 ANKRD10Q9NXR5 420 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 PLA2G3Q9NZ20 509 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 ERRFI1Q9UJM3 462 aaPredicted RBP9.25□□□□□ -0.93
NUP54-203ENST00000504173 PCDHB14Q9Y5E9 798 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 CPAMD8Q8IZJ3 1885 aa9.25□□□□□ -0.93
NUP54-203ENST00000504173 NBEAL1Q6ZS30 2694 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 OR5H15A6NDH6 313 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 A8MVJ9 347 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 CAPN14A8MX76 684 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 K7EM74 188 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 FBP2O00757 339 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 MRASO14807 208 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 TO15178 435 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 ZNF354AO60765 605 aaPredicted RBP9.24□□□□□ -0.93
NUP54-203ENST00000504173 OR6B1O95007 311 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 NKX2-2O95096 273 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 CT45A8P0DMV1 189 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 CT45A9P0DMV2 189 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 ACP2P11117 423 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 ABCD3P28288 659 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 PTPN6P29350 595 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 PRDX6P30041 224 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 TRHRP34981 398 aaPredicted RBP9.24□□□□□ -0.93
NUP54-203ENST00000504173 KRT20P35900 424 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 CYB561P49447 251 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 TMED10P49755 219 aaKnown RBP9.24□□□□□ -0.93
NUP54-203ENST00000504173 KHKP50053 298 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 ANXA11P50995 505 aaKnown RBP9.24□□□□□ -0.93
NUP54-203ENST00000504173 CASP9P55211 416 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 PLCXD2Q0VAA5 305 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 TUBA3CQ13748 450 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 DUSP5Q16690 384 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 CT45A2Q5DJT8 189 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 LRIF1Q5T3J3 769 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 TNFAIP8L2Q6P589 184 aaPredicted RBP9.24□□□□□ -0.93
NUP54-203ENST00000504173 TUBA3EQ6PEY2 450 aa9.24□□□□□ -0.93
NUP54-203ENST00000504173 IL20RBQ6UXL0 311 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms