RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 HERV-K104P63124 156 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 RPL24P83731 157 aaKnown RBP5.94□□□□□ -1.46
CLCN3-204ENST00000504131 SYDE1Q6ZW31 735 aaPredicted RBP5.94□□□□□ -1.46
CLCN3-204ENST00000504131 CPNE9Q8IYJ1 553 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 OR10J5Q8NHC4 309 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 ABHD3Q8WU67 409 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 WNT8BQ93098 351 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 KLHDC3Q9BQ90 382 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 HDHD5Q9BXW7 423 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 TSPAN10Q9H1Z9 355 aaPredicted RBP5.94□□□□□ -1.46
CLCN3-204ENST00000504131 PORCNQ9H237 461 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 SRMSQ9H3Y6 488 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 DDIT4Q9NX09 232 aa5.94□□□□□ -1.46
CLCN3-204ENST00000504131 GLYATL1P3A0A0U1RQE8 302 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 PRKYO43930 277 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 TPST2O60704 377 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 TSPAN15O95858 294 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 AKR1A1P14550 325 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 TEAD1P28347 426 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 VIPR2P41587 438 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 RAG2P55895 527 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 IL13RA1P78552 427 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 GALNTL6Q49A17 601 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 TMEM177Q53S58 311 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 EOGTQ5NDL2 527 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 REP15Q6BDI9 236 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 SHC4Q6S5L8 630 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 VN1R5Q7Z5H4 357 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 LCORLQ8N3X6 602 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 SLC44A3Q8N4M1 653 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 ZNF738Q8NE65 137 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 OR9I1Q8NGQ6 314 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 OR6N1Q8NGY5 312 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 MRGPRDQ8TDS7 321 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 CENPNQ96H22 339 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-204ENST00000504131 MS4A3Q96HJ5 214 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 ZNF583Q96ND8 569 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 TGM7Q96PF1 710 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 KCNA7Q96RP8 456 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 LYRM2Q9NU23 88 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-204ENST00000504131 TUBE1Q9UJT0 475 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 RAB22AQ9UL26 194 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 KLK4Q9Y5K2 254 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 LYVE1Q9Y5Y7 322 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 AREGP15514 252 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 S100A11P31949 105 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 CDK8P49336 464 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 CDH8P55286 799 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 RAP1AP62834 184 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 EXOSC2Q13868 293 aaKnown RBP5.93□□□□□ -1.46
CLCN3-204ENST00000504131 SLC10A1Q14973 349 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 GOLGA7BQ2TAP0 167 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 ERFEQ4G0M1 354 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 CLLU1Q5K131 121 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 KIAA0895LQ68EN5 471 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 DHRS4L2Q6PKH6 230 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 GPRIN3Q6ZVF9 776 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 THOC6Q86W42 341 aaKnown RBP5.93□□□□□ -1.46
CLCN3-204ENST00000504131 LRRC56Q8IYG6 542 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-204ENST00000504131 MCOLN2Q8IZK6 566 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 FBXO36Q8NEA4 188 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 SLCO2A1Q92959 643 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 KIF12Q96FN5 646 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 ADGRG7Q96K78 797 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 CPNE1Q99829 537 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 C2orf88Q9BSF0 95 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 DPH7Q9BTV6 452 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 PECRQ9BY49 303 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 YTHDF1Q9BYJ9 559 aaKnown RBP5.93□□□□□ -1.46
CLCN3-204ENST00000504131 PDLIM7Q9NR12 457 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 RNF181Q9P0P0 153 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 CDYLQ9Y232 598 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 CDH10Q9Y6N8 788 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 PHRF1Q9P1Y6 1649 aaKnown RBP5.93□□□□□ -1.46
CLCN3-204ENST00000504131 SLIT1O75093 1534 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 SLC43A1O75387 559 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 RHBDL1O75783 438 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 PMP2P02689 132 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 OR12D1P0DN82 309 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 ITGAMP11215 1152 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 HOXA9P31269 272 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 BMP8BP34820 402 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 OR4D2P58180 307 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 GRM2Q14416 872 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 FAM109BQ6ICB4 259 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-204ENST00000504131 PLBD1Q6P4A8 553 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 LINGO4Q6UY18 593 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 ASRGL1Q7L266 308 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 BMP8AQ7Z5Y6 402 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 RIOX2Q8IUF8 465 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 KLHDC8BQ8IXV7 354 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 FAM71CQ8NEG0 241 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 TMEM234Q8WY98 164 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 HAS1Q92839 578 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 NODALQ96S42 347 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 UTS2RQ9UKP6 389 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 PNPLA6Q8IY17 1366 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 SLC5A10A0PJK1 596 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 GSG1L2A8MUP6 293 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 KCNU1A8MYU2 1149 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms