RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 KLF13Q9Y2Y9 288 aaPredicted RBP15.16■□□□□ 0.02
SCLT1-205ENST00000503401 PCDHGB6Q9Y5F9 930 aa15.16■□□□□ 0.02
SCLT1-205ENST00000503401 TSPAN2O60636 221 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 NKX2-2O95096 273 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 P04436 131 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 ALOX5P09917 674 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 UQCRC2P22695 453 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 IL12BP29460 328 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 CHI3L1P36222 383 aaPredicted RBP15.15■□□□□ 0.02
SCLT1-205ENST00000503401 DNASE1L1P49184 302 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 GTDC1Q4AE62 458 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 C6orf10Q5SRN2 563 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 SPATA21Q7Z572 469 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 DND1Q8IYX4 353 aaKnown RBP15.15■□□□□ 0.02
SCLT1-205ENST00000503401 CDS1Q92903 461 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 HGDQ93099 445 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 SLC35G5Q96KT7 338 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 COL21A1Q96P44 957 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 NODALQ96S42 347 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 ACTRT3Q9BYD9 372 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 PROK2Q9HC23 129 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 SLC52A3Q9NQ40 469 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 SACM1LQ9NTJ5 587 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 CNOT11Q9UKZ1 510 aaKnown RBP15.15■□□□□ 0.02
SCLT1-205ENST00000503401 VPS4AQ9UN37 437 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 FAF1Q9UNN5 650 aaPredicted RBP15.15■□□□□ 0.02
SCLT1-205ENST00000503401 KCNE3Q9Y6H6 103 aa15.15■□□□□ 0.02
SCLT1-205ENST00000503401 NCKAP5O14513 1909 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 PYCARD-AS1I3L0S3 204 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 TP53I11O14683 189 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 IGKV1D-16P01601 117 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 MATN1P21941 496 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 KRT20P35900 424 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 MRPS22P82650 360 aaKnown RBP15.14■□□□□ 0.01
SCLT1-205ENST00000503401 CYP27C1Q4G0S4 372 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 EXOSC6Q5RKV6 272 aaKnown RBP15.14■□□□□ 0.01
SCLT1-205ENST00000503401 CCNJQ5T5M9 372 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 CDC73Q6P1J9 531 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 ZCCHC12Q6PEW1 402 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 BHLHB9Q6PI77 547 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 ANGPTL8Q6UXH0 198 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 CPLX4Q7Z7G2 160 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 COX18Q8N8Q8 333 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 PNPT1Q8TCS8 783 aaKnown RBP15.14■□□□□ 0.01
SCLT1-205ENST00000503401 SPPL2AQ8TCT8 520 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 GTF2H4Q92759 462 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 SLC35A4Q96G79 324 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 ITCHQ96J02 903 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 FRMD6Q96NE9 622 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 OR7D2Q96RA2 312 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 TSPAN10Q9H1Z9 355 aaPredicted RBP15.14■□□□□ 0.01
SCLT1-205ENST00000503401 RMND5AQ9H871 391 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 SAR1AQ9NR31 198 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 FLRT3Q9NZU0 649 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 FREM3P0C091 2139 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 ZGRF1Q86YA3 2104 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 OR6C70A6NIJ9 312 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 KLRC4-KLRK1H3BQV0 150 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 WISP2O76076 250 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 ANP32DO95626 131 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 NAGAP17050 411 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 CNR1P21554 472 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 MAN2A2P49641 1150 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 IRX1P78414 480 aaPredicted RBP15.14■□□□□ 0.01
SCLT1-205ENST00000503401 IGFBP7Q16270 282 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 DECR1Q16698 335 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 PAGE3Q5JUK9 113 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 RNFT1Q5M7Z0 435 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 SAXO2Q658L1 398 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 FIGNL1Q6PIW4 674 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 FAM180AQ6UWF9 173 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 MSANTD1Q6ZTZ1 278 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 FBXW8Q8N3Y1 598 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 OR2M7Q8NG81 312 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 ADAMTS15Q8TE58 950 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 NMUR2Q9GZQ4 415 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 NSRP1Q9H0G5 558 aaKnown RBP15.14■□□□□ 0.01
SCLT1-205ENST00000503401 FBXO34Q9NWN3 711 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 SLAMF8Q9P0V8 285 aa15.14■□□□□ 0.01
SCLT1-205ENST00000503401 C2orf72A6NCS6 295 aa15.13■□□□□ 0.01
SCLT1-205ENST00000503401 KCNK2O95069 426 aa15.13■□□□□ 0.01
SCLT1-205ENST00000503401 KCNH1O95259 989 aa15.13■□□□□ 0.01
SCLT1-205ENST00000503401 CYP4B1P13584 511 aa15.13■□□□□ 0.01
SCLT1-205ENST00000503401 PTPN6P29350 595 aa15.13■□□□□ 0.01
SCLT1-205ENST00000503401 KCNJ2P63252 427 aa15.13■□□□□ 0.01
SCLT1-205ENST00000503401 LRRC74AQ0VAA2 488 aa15.13■□□□□ 0.01
SCLT1-205ENST00000503401 INAQ16352 499 aa15.13■□□□□ 0.01
SCLT1-205ENST00000503401 TNFAIP8L2Q6P589 184 aaPredicted RBP15.13■□□□□ 0.01
SCLT1-205ENST00000503401 NUP54Q7Z3B4 507 aa15.13■□□□□ 0.01
SCLT1-205ENST00000503401 ZAR1Q86SH2 424 aa15.13■□□□□ 0.01
SCLT1-205ENST00000503401 ZNF605Q86T29 641 aa15.13■□□□□ 0.01
SCLT1-205ENST00000503401 RNF130Q86XS8 419 aa15.13■□□□□ 0.01
SCLT1-205ENST00000503401 TRIML2Q8N7C3 387 aa15.13■□□□□ 0.01
SCLT1-205ENST00000503401 FAM98AQ8NCA5 519 aaKnown RBP15.13■□□□□ 0.01
SCLT1-205ENST00000503401 NEURL3Q96EH8 262 aa15.13■□□□□ 0.01
SCLT1-205ENST00000503401 AURKBQ96GD4 344 aaPredicted RBP15.13■□□□□ 0.01
SCLT1-205ENST00000503401 STACQ99469 402 aa15.13■□□□□ 0.01
SCLT1-205ENST00000503401 DOHHQ9BU89 302 aa15.13■□□□□ 0.01
SCLT1-205ENST00000503401 OR51I1Q9H343 314 aa15.13■□□□□ 0.01
SCLT1-205ENST00000503401 PIGUQ9H490 435 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms