RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 ARAFP10398 606 aa18.85■□□□□ 0.61
CDC42SE2-206ENST00000503291 NR2F1P10589 423 aa18.85■□□□□ 0.61
CDC42SE2-206ENST00000503291 ME2P23368 584 aa18.85■□□□□ 0.61
CDC42SE2-206ENST00000503291 PIGAP37287 484 aa18.85■□□□□ 0.61
CDC42SE2-206ENST00000503291 POU6F2P78424 691 aaPredicted RBP18.85■□□□□ 0.61
CDC42SE2-206ENST00000503291 MRPS22P82650 360 aaKnown RBP18.85■□□□□ 0.61
CDC42SE2-206ENST00000503291 CDK6Q00534 326 aa18.85■□□□□ 0.61
CDC42SE2-206ENST00000503291 RBBP4Q09028 425 aa18.85■□□□□ 0.61
CDC42SE2-206ENST00000503291 CHAF1BQ13112 559 aa18.85■□□□□ 0.61
CDC42SE2-206ENST00000503291 MAPK11Q15759 364 aa18.85■□□□□ 0.61
CDC42SE2-206ENST00000503291 ARHGAP11BQ3KRB8 267 aa18.85■□□□□ 0.61
CDC42SE2-206ENST00000503291 CYP27C1Q4G0S4 372 aa18.85■□□□□ 0.61
CDC42SE2-206ENST00000503291 FCRLBQ6BAA4 426 aa18.85■□□□□ 0.61
CDC42SE2-206ENST00000503291 H3F3CQ6NXT2 135 aa18.85■□□□□ 0.61
CDC42SE2-206ENST00000503291 BRIX1Q8TDN6 353 aaKnown RBP18.85■□□□□ 0.61
CDC42SE2-206ENST00000503291 PSMF1Q92530 271 aa18.85■□□□□ 0.61
CDC42SE2-206ENST00000503291 HSPBAP1Q96EW2 488 aa18.85■□□□□ 0.61
CDC42SE2-206ENST00000503291 LMF1Q96S06 567 aa18.85■□□□□ 0.61
CDC42SE2-206ENST00000503291 LIPT1Q9Y234 373 aa18.85■□□□□ 0.61
CDC42SE2-206ENST00000503291 TMEM247A6NEH6 219 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 TAF4O00268 1085 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 TO15178 435 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 ACOX3O15254 700 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 BCHEP06276 602 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 ITGA3P26006 1051 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 KCNJ2P63252 427 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 ZNF630Q2M218 657 aaPredicted RBP18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 DEFB109BQ30KR1 87 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 GPAT3Q53EU6 434 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 DCST2Q5T1A1 773 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 BROXQ5VW32 411 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 JMJD6Q6NYC1 403 aaPredicted RBP18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 ERICH5Q6P6B1 374 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 FIGNL1Q6PIW4 674 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 RPS19BP1Q86WX3 136 aaKnown RBP18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 PROSER1Q86XN7 944 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 MICU2Q8IYU8 434 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 SLC5A8Q8N695 610 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 SIRT6Q8N6T7 355 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 ANKFN1Q8N957 763 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 CHDHQ8NE62 594 aaPredicted RBP18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 NFKBIDQ8NI38 313 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 SDF2Q99470 211 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 CDCP1Q9H5V8 836 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 LAMA5O15230 3695 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 SLC28A2O43868 658 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 ZNF354AO60765 605 aaPredicted RBP18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 OR2J2O76002 312 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 ITPKBP27987 946 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 HTR1EP28566 365 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 SCARB2Q14108 478 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 OLIG3Q7RTU3 272 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 GALNT10Q86SR1 603 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 PRR22Q8IZ63 422 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 ARMC10Q8N2F6 343 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 BCORP1Q8N888 145 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 TMBIM1Q969X1 311 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 UTP4Q969X6 686 aaKnown RBP18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 DOCK10Q96BY6 2186 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 CCDC124Q96CT7 223 aaKnown RBP18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 TMEM19Q96HH6 336 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 LHPPQ9H008 270 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 PCDHAC1Q9H158 963 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 EGFL7Q9UHF1 273 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 LOC400499M0QZD8 3231 aa18.84■□□□□ 0.61
CDC42SE2-206ENST00000503291 CHD8Q9HCK8 2581 aa18.83■□□□□ 0.61
CDC42SE2-206ENST00000503291 ANKRD65E5RJM6 399 aa18.83■□□□□ 0.61
CDC42SE2-206ENST00000503291 ABCD3P28288 659 aa18.83■□□□□ 0.61
CDC42SE2-206ENST00000503291 RFX3P48380 749 aa18.83■□□□□ 0.61
CDC42SE2-206ENST00000503291 NRG3P56975 720 aa18.83■□□□□ 0.61
CDC42SE2-206ENST00000503291 TNIP2Q8NFZ5 429 aa18.83■□□□□ 0.61
CDC42SE2-206ENST00000503291 FAM110BQ8TC76 370 aa18.83■□□□□ 0.61
CDC42SE2-206ENST00000503291 TRNT1Q96Q11 434 aaKnown RBP18.83■□□□□ 0.61
CDC42SE2-206ENST00000503291 FBXO34Q9NWN3 711 aa18.83■□□□□ 0.61
CDC42SE2-206ENST00000503291 SLC7A8Q9UHI5 535 aa18.83■□□□□ 0.61
CDC42SE2-206ENST00000503291 C5orf58C9J3I9 102 aa18.83■□□□□ 0.6
CDC42SE2-206ENST00000503291 MAN1A2O60476 641 aa18.83■□□□□ 0.6
CDC42SE2-206ENST00000503291 FCMRO60667 390 aa18.83■□□□□ 0.6
CDC42SE2-206ENST00000503291 ITGA10O75578 1167 aa18.83■□□□□ 0.6
CDC42SE2-206ENST00000503291 H6PDO95479 791 aa18.83■□□□□ 0.6
CDC42SE2-206ENST00000503291 AK1P00568 194 aa18.83■□□□□ 0.6
CDC42SE2-206ENST00000503291 IGKV1D-16P01601 117 aa18.83■□□□□ 0.6
CDC42SE2-206ENST00000503291 CHRM4P08173 479 aa18.83■□□□□ 0.6
CDC42SE2-206ENST00000503291 VEZF1Q14119 521 aa18.83■□□□□ 0.6
CDC42SE2-206ENST00000503291 DECR1Q16698 335 aa18.83■□□□□ 0.6
CDC42SE2-206ENST00000503291 B3GNTL1Q67FW5 361 aaPredicted RBP18.83■□□□□ 0.6
CDC42SE2-206ENST00000503291 REEP3Q6NUK4 255 aa18.83■□□□□ 0.6
CDC42SE2-206ENST00000503291 TAGAPQ8N103 731 aa18.83■□□□□ 0.6
CDC42SE2-206ENST00000503291 GALNT16Q8N428 558 aa18.83■□□□□ 0.6
CDC42SE2-206ENST00000503291 METTL25Q8N6Q8 603 aa18.83■□□□□ 0.6
CDC42SE2-206ENST00000503291 RUBCNLQ9H714 662 aa18.83■□□□□ 0.6
CDC42SE2-206ENST00000503291 NPFFR2Q9Y5X5 522 aa18.83■□□□□ 0.6
CDC42SE2-206ENST00000503291 NADKO95544 446 aaPredicted RBP18.82■□□□□ 0.6
CDC42SE2-206ENST00000503291 PCGF2P35227 344 aa18.82■□□□□ 0.6
CDC42SE2-206ENST00000503291 CRISP3P54108 245 aa18.82■□□□□ 0.6
CDC42SE2-206ENST00000503291 SOX8P57073 446 aa18.82■□□□□ 0.6
CDC42SE2-206ENST00000503291 MLF1P58340 268 aa18.82■□□□□ 0.6
CDC42SE2-206ENST00000503291 TRIM25Q14258 630 aaKnown RBP18.82■□□□□ 0.6
CDC42SE2-206ENST00000503291 GNA13Q14344 377 aa18.82■□□□□ 0.6
CDC42SE2-206ENST00000503291 FXNQ16595 210 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms