RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 ZNF764Q96H86 408 aaPredicted RBP5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 SFXN2Q96NB2 322 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 CDK15Q96Q40 435 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 ZNF382Q96SR6 550 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 SLC39A3Q9BRY0 314 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 MRPL46Q9H2W6 279 aaKnown RBP5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 PTGES2Q9H7Z7 377 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 GRPEL1Q9HAV7 217 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 GALNT9Q9HCQ5 603 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 FANCFQ9NPI8 374 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 SERHLQ9NQF3 203 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 PLSCR4Q9NRQ2 329 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 GLRX2Q9NS18 164 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 XPR1Q9UBH6 696 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 STOML1Q9UBI4 398 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 BCAP29Q9UHQ4 241 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 ZNF225Q9UK10 706 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 MRTO4Q9UKD2 239 aaKnown RBP5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 SLC12A4Q9UP95 1085 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 AP4B1Q9Y6B7 739 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 MED12Q93074 2177 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 MAP1AP78559 2803 aaPredicted RBP5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 DNHD1Q96M86 4753 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 C7orf72A4D263 438 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 CCDC151A5D8V7 595 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 SLC22A20A6NK97 555 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 MYO1GB0I1T2 1018 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 C16orf97H3BN30 126 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 FADS1O60427 444 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 COQ9O75208 318 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 ULK1O75385 1050 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 ERAL1O75616 437 aaKnown RBP5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 REM1O75628 298 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 LRATO95237 230 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 TGM6O95932 706 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 ENO1P06733 434 aaKnown RBP5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 NGFRP08138 427 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 INHBAP08476 426 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 SBK3P0C264 359 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 ZNF17P17021 662 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 IMPDH1P20839 514 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 GRK2P25098 689 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 DPP4P27487 766 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 LOXP28300 417 aaPredicted RBP5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 LCN1P31025 176 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 KRT20P35900 424 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 UGT2B10P36537 528 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 HSD17B3P37058 310 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 FEN1P39748 380 aaKnown RBP5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 KIR2DL2P43627 348 aaPredicted RBP5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 RPS3AP61247 264 aaKnown RBP5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 ETF1P62495 437 aaKnown RBP5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 CLCQ05315 142 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 DUSP2Q05923 314 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 C17orf67Q0P5P2 114 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 EXOSC7Q15024 291 aaKnown RBP5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 RASA2Q15283 850 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 ETFDHQ16134 617 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 ERCC6LQ2NKX8 1250 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 TMEM44Q2T9K0 475 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 LGSNQ5TDP6 509 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 ADAM5Q6NVV9 412 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 LETMD1Q6P1Q0 360 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 ZNF474Q6S9Z5 364 aaPredicted RBP5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 DNAJC14Q6Y2X3 702 aaPredicted RBP5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 SH2D5Q6ZV89 423 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 FAM214BQ7L5A3 538 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 CHMP1BQ7LBR1 199 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 SSX8Q7RTT4 187 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 LUZP2Q86TE4 346 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 GRAMD2AQ8IUY3 354 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 P3H2Q8IVL5 708 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 PRR22Q8IZ63 422 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 OR2M3Q8NG83 312 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 SPATA3Q8NHX4 192 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 PPP1R14CQ8TAE6 165 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 SREK1Q8WXA9 508 aaKnown RBP5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 TMBIM1Q969X1 311 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 MTBPQ96DY7 904 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 PGM2Q96G03 612 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 WFIKKN1Q96NZ8 548 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 ADOQ96SZ5 270 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 USB1Q9BQ65 265 aaKnown RBP5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 PIGQQ9BRB3 760 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 LMF2Q9BU23 707 aaKnown RBP5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 GP6Q9HCN6 339 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 PRM3Q9NNZ6 103 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 SLC35C2Q9NQQ7 365 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 GIMAP4Q9NUV9 329 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 ZNF701Q9NV72 531 aaPredicted RBP5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 FAM120CQ9NX05 1096 aaKnown RBP5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 CPSF2Q9P2I0 782 aaKnown RBP5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 HEY2Q9UBP5 337 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 FBXL2Q9UKC9 423 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 UTS2RQ9UKP6 389 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 C19orf53Q9UNZ5 99 aaPredicted RBP5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 MAPRE3Q9UPY8 281 aa5.51□□□□□ -1.53
LSM3P4-201ENST00000502948 FN1P02751 2386 aaKnown RBP5.5□□□□□ -1.53
LSM3P4-201ENST00000502948 A0A087WZY1 265 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms