RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 DIMT1Q9UNQ2 313 aaKnown RBP16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 M0R3H8 397 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 GABRPO00591 440 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 NARSO43776 548 aaKnown RBP16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 STC2O76061 302 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 CYB5AP00167 134 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 SOX2P48431 317 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 SLC11A1P49279 550 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 OR2G6Q5TZ20 316 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 ALKAL1Q6UXT8 129 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 CIDECQ96AQ7 238 aaPredicted RBP16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 LOXHD1Q8IVV2 1947 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 J3KTA2 159 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 CLDN4O14493 209 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 SMAD9O15198 467 aaKnown RBP16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 FCER2P06734 321 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 NPR2P20594 1047 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 CBX5P45973 191 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 VSX2P58304 361 aaPredicted RBP16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 POGLUT1Q8NBL1 392 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 C1QTNF3Q9BXJ4 246 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 IL23AQ9NPF7 189 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 ARPC1BO15143 372 aaKnown RBP16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 CD6P30203 668 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 TGFBR1P36897 503 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 DLX5P56178 289 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 CAV3P56539 151 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 POMZP3Q6PJE2 187 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 WDR53Q7Z5U6 358 aaPredicted RBP16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 MFSD4AQ8N468 514 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 NUP43Q8NFH3 380 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 METTL21AQ8WXB1 218 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 F2RL3Q96RI0 385 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 CDCA4Q9BXL8 241 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 MFFQ9GZY8 342 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 RNF167Q9H6Y7 350 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 HEBP2Q9Y5Z4 205 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 SPDEFO95238 335 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 ARAFP10398 606 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 RPL34P49207 117 aaKnown RBP16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 ETV1P50549 477 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 CLCN7P51798 805 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 BTN3A2P78410 334 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 MINDY4Q4G0A6 757 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 KIAA0319Q5VV43 1072 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 ANKRD34AQ69YU3 496 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 TMPRSS12Q86WS5 348 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 CMTM8Q8IZV2 173 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 OR56A3Q8NH54 315 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 OR51A7Q8NH64 312 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 CASTOR1Q8WTX7 329 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 RBPMSQ93062 196 aaKnown RBP16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 FCRL1Q96LA6 429 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 NEDD4LQ96PU5 975 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 MRI1Q9BV20 369 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 FN3KQ9H479 309 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 TMPRSS11EQ9UL52 423 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 H7BY64 318 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 SLC16A8O95907 504 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 SEC13P55735 322 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 OPCMLQ14982 345 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 VITQ6UXI7 678 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 NRMQ8IXM6 262 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 JAGN1Q8N5M9 183 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 PRAP1Q96NZ9 151 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 NIPSNAP1Q9BPW8 284 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 GABARAPL3Q9BY60 117 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 A0A1B0GVT2 93 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 A0A1W2PPL8 197 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 TRAPPC13A5PLN9 417 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 MEIS3P2A8K0S8 358 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 INPPL1O15357 1258 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 IFNA21P01568 189 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 PIPP12273 146 aaPredicted RBP16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 PTNP21246 168 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 CLCNKAP51800 687 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 AFF1P51825 1210 aaKnown RBP16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 RPS25P62851 125 aaKnown RBP16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 FAM189A2Q15884 450 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 LEXMQ3ZCV2 418 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 SBSNQ6UWP8 590 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 HMGN2P46Q86SG4 172 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 OR2L3Q8NG85 312 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 SLC7A13Q8TCU3 470 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 SLC25A46Q96AG3 418 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 ZNF689Q96CS4 500 aaPredicted RBP16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 MYNNQ9NPC7 610 aa16.29■□□□□ 0.2
HMGXB3-201ENST00000502717 GATBO75879 557 aaKnown RBP16.28■□□□□ 0.2
HMGXB3-201ENST00000502717 S100GP29377 79 aa16.28■□□□□ 0.2
HMGXB3-201ENST00000502717 GJA5P36382 358 aa16.28■□□□□ 0.2
HMGXB3-201ENST00000502717 PRKXP51817 358 aa16.28■□□□□ 0.2
HMGXB3-201ENST00000502717 SOWAHCQ53LP3 525 aaPredicted RBP16.28■□□□□ 0.2
HMGXB3-201ENST00000502717 SIGIRRQ6IA17 410 aa16.28■□□□□ 0.2
HMGXB3-201ENST00000502717 ARHGAP11AQ6P4F7 1023 aa16.28■□□□□ 0.2
HMGXB3-201ENST00000502717 SH3RF2Q8TEC5 729 aa16.28■□□□□ 0.2
HMGXB3-201ENST00000502717 HS6ST2Q96MM7 605 aa16.28■□□□□ 0.2
HMGXB3-201ENST00000502717 BCL2L14Q9BZR8 327 aa16.28■□□□□ 0.2
HMGXB3-201ENST00000502717 DPEP2Q9H4A9 486 aa16.28■□□□□ 0.2
HMGXB3-201ENST00000502717 BABAM2Q9NXR7 383 aa16.28■□□□□ 0.2
HMGXB3-201ENST00000502717 NDUFAF4Q9P032 175 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms