RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 THUMPD3Q9BV44 507 aaKnown RBP2.28□□□□□ -2.04
RIF1-212ENST00000498041 OCR1Q9BZK8 76 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 STRADBQ9C0K7 418 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 ELOVL4Q9GZR5 314 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 DHX33Q9H6R0 707 aaKnown RBP2.28□□□□□ -2.04
RIF1-212ENST00000498041 SMYD3Q9H7B4 428 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 NHEJ1Q9H9Q4 299 aaPredicted RBP2.28□□□□□ -2.04
RIF1-212ENST00000498041 KCNK13Q9HB14 408 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 UBE2TQ9NPD8 197 aaPredicted RBP2.28□□□□□ -2.04
RIF1-212ENST00000498041 MRGBPQ9NV56 204 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 ZNHIT6Q9NWK9 470 aaKnown RBP2.28□□□□□ -2.04
RIF1-212ENST00000498041 GPATCH2LQ9NWQ4 482 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 ZNF446Q9NWS9 450 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 MYOFQ9NZM1 2061 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 MYLKQ15746 1914 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 ATG2AQ2TAZ0 1938 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 NLRC5Q86WI3 1866 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 THSD7BQ9C0I4 1608 aa2.28□□□□□ -2.05
RIF1-212ENST00000498041 USP24Q9UPU5 2620 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 NUP205Q92621 2012 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 RALGAPA2Q2PPJ7 1873 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 UQCRHLA0A096LP55 91 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 HAS3O00219 553 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 SLC30A4O14863 429 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 ADAM12O43184 909 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 ZNF749O43361 778 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 N4BP1O75113 896 aaKnown RBP2.27□□□□□ -2.05
RIF1-212ENST00000498041 GRAP2O75791 330 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 LYPLA2O95372 231 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 UQCRHP07919 91 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 RHOXF2BP0C7M4 288 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 CYBAP13498 195 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 FOLR2P14207 255 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 SRD5A2P31213 254 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 CD52P31358 61 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 RPL9P32969 192 aaKnown RBP2.27□□□□□ -2.05
RIF1-212ENST00000498041 MAGEA1P43355 309 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 IER3P46695 156 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 KCNJ1P48048 391 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 GPC3P51654 580 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 LIMK2P53671 638 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 GNG11P61952 73 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 RBP5P82980 135 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 CYP24A1Q07973 514 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 C15orf32Q32M92 178 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 CCDC122Q5T0U0 273 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 MPP7Q5T2T1 576 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 SPECC1LQ69YQ0 1117 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 SHQ1Q6PI26 577 aaKnown RBP2.27□□□□□ -2.05
RIF1-212ENST00000498041 C17orf107Q6ZR85 190 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 PAQR9Q6ZVX9 377 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 TIPARPQ7Z3E1 657 aaKnown RBP2.27□□□□□ -2.05
RIF1-212ENST00000498041 FAM228AQ86W67 206 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 CARM1Q86X55 608 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 MARCH9Q86YJ5 346 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 KLHL7Q8IXQ5 586 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 TDHQ8IZJ6 230 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 CCDC12Q8WUD4 166 aaPredicted RBP2.27□□□□□ -2.05
RIF1-212ENST00000498041 CKAP2Q8WWK9 683 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 CORO2AQ92828 525 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 SPATA17Q96L03 361 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 ALKBH3Q96Q83 286 aaPredicted RBP2.27□□□□□ -2.05
RIF1-212ENST00000498041 SMIM14Q96QK8 99 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 RHOXF2Q9BQY4 288 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 ADNPQ9H2P0 1102 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 NXF3Q9H4D5 531 aaKnown RBP2.27□□□□□ -2.05
RIF1-212ENST00000498041 THAP9Q9H5L6 903 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 MOB1AQ9H8S9 216 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 PARVGQ9HBI0 331 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 SLCO1C1Q9NYB5 712 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 FAM153AQ9UHL3 310 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 TSPAN16Q9UKR8 245 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 TRAF3IP3Q9Y228 551 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 KIF3AQ9Y496 699 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 AUP1Q9Y679 476 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 STYXL1Q9Y6J8 313 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 RALGAPA1Q6GYQ0 2036 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 SHROOM3Q8TF72 1996 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 GREB1Q4ZG55 1949 aa2.27□□□□□ -2.05
RIF1-212ENST00000498041 PLXNA3P51805 1871 aa2.26□□□□□ -2.05
RIF1-212ENST00000498041 PLXNA4Q9HCM2 1894 aa2.26□□□□□ -2.05
RIF1-212ENST00000498041 NFASCO94856 1347 aa2.26□□□□□ -2.05
RIF1-212ENST00000498041 MROH7Q68CQ1 1323 aa2.26□□□□□ -2.05
RIF1-212ENST00000498041 TRGV8A0A0C4DH27 118 aa2.26□□□□□ -2.05
RIF1-212ENST00000498041 A0A0U1RQS6 177 aa2.26□□□□□ -2.05
RIF1-212ENST00000498041 ANKDD1BA6NHY2 528 aa2.26□□□□□ -2.05
RIF1-212ENST00000498041 SLC15A5A6NIM6 579 aa2.26□□□□□ -2.05
RIF1-212ENST00000498041 A8MU76 341 aa2.26□□□□□ -2.05
RIF1-212ENST00000498041 GOLGA8SH3BPF8 625 aa2.26□□□□□ -2.05
RIF1-212ENST00000498041 K7EQG2 157 aa2.26□□□□□ -2.05
RIF1-212ENST00000498041 K7ERI5 159 aa2.26□□□□□ -2.05
RIF1-212ENST00000498041 LAD1O00515 517 aa2.26□□□□□ -2.05
RIF1-212ENST00000498041 PDXKO00764 312 aa2.26□□□□□ -2.05
RIF1-212ENST00000498041 CETN3O15182 167 aa2.26□□□□□ -2.05
RIF1-212ENST00000498041 CTDSPLO15194 276 aa2.26□□□□□ -2.05
RIF1-212ENST00000498041 CALUO43852 315 aaPredicted RBP2.26□□□□□ -2.05
RIF1-212ENST00000498041 GPRIN2O60269 458 aa2.26□□□□□ -2.05
RIF1-212ENST00000498041 CLN5O75503 358 aa2.26□□□□□ -2.05
RIF1-212ENST00000498041 BANF1O75531 89 aa2.26□□□□□ -2.05
RIF1-212ENST00000498041 PALMO75781 387 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms