RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 MTTPP55157 894 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 IGLV3-21P80748 117 aaPredicted RBP2.46□□□□□ -2.02
PSPC1-205ENST00000497722 ZNF33BQ06732 778 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 IL18R1Q13478 541 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 PAGE2BQ5JRK9 111 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 LGSNQ5TDP6 509 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 IRGCQ6NXR0 463 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 Q7L0L9 218 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 LRRC70Q7Z2Q7 622 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 AMZ2Q86W34 360 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 PARGQ86W56 976 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 ZNF525Q8N782 197 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 ANKRD20A12PQ8NF67 263 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 ZNF397Q8NF99 534 aaPredicted RBP2.46□□□□□ -2.02
PSPC1-205ENST00000497722 CCDC26Q8TAB7 109 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 GIPC3Q8TF64 312 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 P3H4Q92791 437 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 DLX4Q92988 240 aaPredicted RBP2.46□□□□□ -2.02
PSPC1-205ENST00000497722 PINX1Q96BK5 328 aaKnown RBP2.46□□□□□ -2.02
PSPC1-205ENST00000497722 VPS39Q96JC1 886 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 TSSK1BQ9BXA7 367 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 POLD4Q9HCU8 107 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 MIEF1Q9NQG6 463 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 ELOVL2Q9NXB9 296 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 SPASTQ9UBP0 616 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 KLHDC2Q9Y2U9 406 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 GON4LQ3T8J9 2241 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 CROCCQ5TZA2 2017 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 ZNF318Q5VUA4 2279 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 FAM168BA1KXE4 195 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 TMEM110-MUSTN1A8MSY1 372 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 H3BTX0 84 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 RASGRF2O14827 1237 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 NOL4O94818 638 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 DUSP14O95147 198 aaKnown RBP2.45□□□□□ -2.02
PSPC1-205ENST00000497722 IGHV3-9P01782 118 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 IGHG3P01860 377 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 CXCL10P02778 98 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 ANXA4P09525 319 aaPredicted RBP2.45□□□□□ -2.02
PSPC1-205ENST00000497722 HOXB7P09629 217 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 RRASP10301 218 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 GAP43P17677 238 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 PTBP1P26599 531 aaKnown RBP eCLIP2.45□□□□□ -2.02
PSPC1-205ENST00000497722 GNPDA1P46926 289 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 STK19P49842 368 aaPredicted RBP2.45□□□□□ -2.02
PSPC1-205ENST00000497722 EMDP50402 254 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 CXCL6P80162 114 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 ZNF85Q03923 595 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 KARSQ15046 597 aaKnown RBP2.45□□□□□ -2.02
PSPC1-205ENST00000497722 UBE2V2Q15819 145 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 CAMK4Q16566 473 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 ACSF3Q4G176 576 aaPredicted RBP2.45□□□□□ -2.02
PSPC1-205ENST00000497722 SLC10A5Q5PT55 438 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 DMKNQ6E0U4 476 aaPredicted RBP2.45□□□□□ -2.02
PSPC1-205ENST00000497722 RAET1GQ6H3X3 334 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 FAM159AQ6UWV7 190 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 RBM43Q6ZSC3 357 aaKnown RBP2.45□□□□□ -2.02
PSPC1-205ENST00000497722 ADGRD2Q7Z7M1 963 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 TMEM110Q86TL2 294 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 CHCHD4Q8N4Q1 142 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 MRAPQ8TCY5 172 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 GTSF1Q8WW33 167 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 ART4Q93070 314 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 ZIM3Q96PE6 472 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 TMEM237Q96Q45 408 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 RANBP9Q96S59 729 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 WRAP53Q9BUR4 548 aaKnown RBP2.45□□□□□ -2.02
PSPC1-205ENST00000497722 HCAR1Q9BXC0 346 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 DEFB126Q9BYW3 111 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 KRT23Q9C075 422 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 KAT8Q9H7Z6 458 aaKnown RBP2.45□□□□□ -2.02
PSPC1-205ENST00000497722 EXOSC3Q9NQT5 275 aaKnown RBP2.45□□□□□ -2.02
PSPC1-205ENST00000497722 IL20RAQ9UHF4 553 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 KLHL21Q9UJP4 597 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 KLF2Q9Y5W3 355 aaPredicted RBP2.45□□□□□ -2.02
PSPC1-205ENST00000497722 RALGAPA1Q6GYQ0 2036 aa2.45□□□□□ -2.02
PSPC1-205ENST00000497722 ABCA7Q8IZY2 2146 aa2.44□□□□□ -2.02
PSPC1-205ENST00000497722 KLF18A0A0U1RQI7 1052 aa2.44□□□□□ -2.02
PSPC1-205ENST00000497722 FRG2CA6NGY1 282 aa2.44□□□□□ -2.02
PSPC1-205ENST00000497722 KLLNB2CW77 178 aa2.44□□□□□ -2.02
PSPC1-205ENST00000497722 PDLIM1O00151 329 aa2.44□□□□□ -2.02
PSPC1-205ENST00000497722 PPIHO43447 177 aaKnown RBP2.44□□□□□ -2.02
PSPC1-205ENST00000497722 SLC2A10O95528 541 aa2.44□□□□□ -2.02
PSPC1-205ENST00000497722 APBB3O95704 486 aa2.44□□□□□ -2.02
PSPC1-205ENST00000497722 CT45A10P0DMU9 189 aa2.44□□□□□ -2.02
PSPC1-205ENST00000497722 MAPK3P27361 379 aaPredicted RBP2.44□□□□□ -2.02
PSPC1-205ENST00000497722 RPL4P36578 427 aaKnown RBP2.44□□□□□ -2.02
PSPC1-205ENST00000497722 ASMTP46597 345 aa2.44□□□□□ -2.02
PSPC1-205ENST00000497722 RGRP47804 291 aa2.44□□□□□ -2.02
PSPC1-205ENST00000497722 OR3A4PP47883 348 aa2.44□□□□□ -2.02
PSPC1-205ENST00000497722 DHPSP49366 369 aaPredicted RBP2.44□□□□□ -2.02
PSPC1-205ENST00000497722 NAPAP54920 295 aa2.44□□□□□ -2.02
PSPC1-205ENST00000497722 YBEYP58557 167 aaPredicted RBP2.44□□□□□ -2.02
PSPC1-205ENST00000497722 MRPS6P82932 125 aaKnown RBP2.44□□□□□ -2.02
PSPC1-205ENST00000497722 GABPB1Q06547 395 aaPredicted RBP2.44□□□□□ -2.02
PSPC1-205ENST00000497722 GAMTQ14353 236 aa2.44□□□□□ -2.02
PSPC1-205ENST00000497722 ZNF699Q32M78 642 aa2.44□□□□□ -2.02
PSPC1-205ENST00000497722 TOR1AIP1Q5JTV8 583 aa2.44□□□□□ -2.02
PSPC1-205ENST00000497722 SLC22A10Q63ZE4 541 aa2.44□□□□□ -2.02
PSPC1-205ENST00000497722 NEK5Q6P3R8 708 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms