RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 BTNL2Q9UIR0 455 aa12.32□□□□□ -0.44
GAPVD1-220ENST00000497580 SDC3O75056 442 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 TGFB1P01137 390 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 ADRB1P08588 477 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 UCHL1P09936 223 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 ACP2P11117 423 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 DRD2P14416 443 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 NFYAP23511 347 aaPredicted RBP12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 MMP11P24347 488 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 FGF9P31371 208 aaPredicted RBP12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 CCR7P32248 378 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 COL9A2Q14055 689 aaPredicted RBP12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 OCLNQ16625 522 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 SWI5Q1ZZU3 235 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 ZNF792Q3KQV3 632 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 SLC6A19Q695T7 634 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 HIST2H2AA3Q6FI13 130 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 C1GALT1Q9NS00 363 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 CYSLTR2Q9NS75 346 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 TAS2R3Q9NYW6 316 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 CNIH4Q9P003 139 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 ANKRD36A6QL64 1941 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 A0A0G2JPF8 293 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 FAM183AA6NL82 134 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 HNRNPCL3B7ZW38 293 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 SGCEO43556 437 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 PRMT3O60678 531 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 HNRNPCL4P0DMR1 293 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 SLC6A11P48066 632 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 UBE2MP61081 183 aaKnown RBP12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 UPP1Q16831 310 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 ZNF630Q2M218 657 aaPredicted RBP12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 SLC25A35Q3KQZ1 300 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 C18orf63Q68DL7 685 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 SLC30A6Q6NXT4 461 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 LRRN1Q6UXK5 716 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 LINGO2Q7L985 606 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 TRMT11Q7Z4G4 463 aaKnown RBP12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 KLHL36Q8N4N3 616 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 GPR26Q8NDV2 337 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 BBS10Q8TAM1 723 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 UBTD2Q8WUN7 234 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 TEFMQ96QE5 360 aaKnown RBP12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 ORAI3Q9BRQ5 295 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 OR51B5Q9H339 312 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 CHST2Q9Y4C5 530 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 STON1Q9Y6Q2 735 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 LTBP3Q9NS15 1303 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 SMIM35A0A1B0GVV1 85 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 FAAHO00519 579 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 PRODHO43272 600 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 SEMA7AO75326 666 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 CBR1P16152 277 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 ASMTP46597 345 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 HMGA2P52926 109 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 DUSP4Q13115 394 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 ZNF177Q13360 481 aaPredicted RBP12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 TUSC3Q13454 348 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 SLC36A4Q6YBV0 504 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 TMPRSS9Q7Z410 1059 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 FAM26EQ8N5C1 309 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 FBXO15Q8NCQ5 510 aaPredicted RBP12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 PAWRQ96IZ0 340 aaKnown RBP12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 ADAT1Q9BUB4 502 aaKnown RBP12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 POLDIP3Q9BY77 421 aaKnown RBP12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 ISG20L2Q9H9L3 353 aaKnown RBP12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 MIEF1Q9NQG6 463 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 TESQ9UGI8 421 aaKnown RBP12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 RCE1Q9Y256 329 aa12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 EXOSC1Q9Y3B2 195 aaKnown RBP12.31□□□□□ -0.44
GAPVD1-220ENST00000497580 IGLV3-10A0A075B6K4 115 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 AIPO00170 330 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 CASC3O15234 703 aaKnown RBP12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 SOX30O94993 753 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 CD9P21926 228 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 HAGHLQ6PII5 290 aaPredicted RBP12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 LRRTM4Q86VH4 590 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 GPC2Q8N158 579 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 ZNF671Q8TAW3 534 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 TMEM19Q96HH6 336 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 FUBP3Q96I24 572 aaKnown RBP eCLIP12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 DMRTA2Q96SC8 542 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 GPA33Q99795 319 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 SARGQ9BW04 601 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 SLC39A1Q9NY26 324 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 H2AFY2Q9P0M6 372 aaPredicted RBP12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 DSPPQ9NZW4 1301 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 A0A1W2PRB8 838 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 TMEM129A0AVI4 362 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 MTMR11A4FU01 709 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 ACRV1P26436 265 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 RAD52P43351 418 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 TAS2R50P59544 299 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 MEF2AQ02078 507 aaPredicted RBP12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 RAB40BQ12829 278 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 SLC36A2Q495M3 483 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 PYHIN1Q6K0P9 492 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 REEP3Q6NUK4 255 aa12.3□□□□□ -0.44
GAPVD1-220ENST00000497580 SLC16A13Q7RTY0 426 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms