RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 TGFBIQ15582 683 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 SUMO4Q6EEV6 95 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 DOK6Q6PKX4 331 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 C6orf89Q6UWU4 347 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 SCARA5Q6ZMJ2 495 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 RNF113BQ8IZP6 322 aaKnown RBP5.44□□□□□ -1.54
BRCA1-224ENST00000497488 EID3Q8N140 333 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 ALLCQ8N6M5 410 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 NEXN-AS1Q8NBZ9 246 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 OR52N5Q8NH56 324 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 PAQR8Q8TEZ7 354 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 PIBF1Q8WXW3 757 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 LHX4Q969G2 390 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 TXNDC15Q96J42 360 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 C8orf76Q96K31 380 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 CATSPER2Q96P56 530 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 SF3B5Q9BWJ5 86 aaKnown RBP5.44□□□□□ -1.54
BRCA1-224ENST00000497488 TSSK1BQ9BXA7 367 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 C1QTNF3Q9BXJ4 246 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 PARD6BQ9BYG5 372 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 RHOJQ9H4E5 214 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 POLD4Q9HCU8 107 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 STARD5Q9NSY2 213 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 AHSPQ9NZD4 102 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 PILRBQ9UKJ0 227 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 VANGL2Q9ULK5 521 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 FZR1Q9UM11 496 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 BZW2Q9Y6E2 419 aaKnown RBP5.44□□□□□ -1.54
BRCA1-224ENST00000497488 PIK3C2AO00443 1686 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 GLI3P10071 1580 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 TRBV5-5A0A0J9YX44 114 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 OR6C75A6NL08 312 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 PROB1E7EW31 1015 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 LSM1O15116 133 aaKnown RBP5.43□□□□□ -1.54
BRCA1-224ENST00000497488 ZNHIT1O43257 154 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 CHMP2AO43633 222 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 FARP2O94887 1054 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-224ENST00000497488 APOA1P02647 267 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 PLEKP08567 350 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-224ENST00000497488 MCF2P10911 925 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 HPGDP15428 266 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 ZNF3P17036 446 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 LHCGRP22888 699 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 CASP14P31944 242 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 TMPOP42166 694 aaKnown RBP5.43□□□□□ -1.54
BRCA1-224ENST00000497488 RAB11AP62491 216 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 NOP14P78316 857 aaKnown RBP5.43□□□□□ -1.54
BRCA1-224ENST00000497488 MRPS6P82932 125 aaKnown RBP5.43□□□□□ -1.54
BRCA1-224ENST00000497488 ZXDAP98168 799 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 TRAF1Q13077 416 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 KLF5Q13887 457 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-224ENST00000497488 RAB11BQ15907 218 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 MICBQ29980 383 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 WASHC2DQ5SRD0 308 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 DMKNQ6E0U4 476 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-224ENST00000497488 OR4C11Q6IEV9 310 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 TCEAL6Q6IPX3 200 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 ZNF585AQ6P3V2 769 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 CCDC80Q76M96 950 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 ASRGL1Q7L266 308 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 MICU2Q8IYU8 434 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 CLIP4Q8N3C7 705 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 OR51G2Q8NGK0 314 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 OLIG1Q8TAK6 271 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 RDH11Q8TC12 318 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 GPR148Q8TDV2 347 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 ASZ1Q8WWH4 475 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 SARAFQ96BY9 339 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 NXPE2Q96DL1 559 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 ZNF274Q96GC6 653 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-224ENST00000497488 PCED1BQ96HM7 432 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 LZTS2Q9BRK4 669 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 NARFLQ9H6Q4 476 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 C8orf33Q9H7E9 229 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-224ENST00000497488 TREM1Q9NP99 234 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 GDF3Q9NR23 364 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 TMEM30AQ9NV96 361 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 FBXL4Q9UKA2 621 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 OR2W1Q9Y3N9 320 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 RHBDD3Q9Y3P4 386 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 CSDC2Q9Y534 153 aaKnown RBP5.43□□□□□ -1.54
BRCA1-224ENST00000497488 R4GN57 208 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 NRAPQ86VF7 1730 aa5.43□□□□□ -1.54
BRCA1-224ENST00000497488 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.43□□□□□ -1.54
BRCA1-224ENST00000497488 A0A1W2PP64 1363 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 KIAA0232Q92628 1395 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 AKAP12Q02952 1782 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 CD8B2A6NJW9 211 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 C12orf71A8MTZ7 269 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 A8MU76 341 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 H3BMH7 237 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 PDLIM1O00151 329 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 CCSO14618 274 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 P2RX6O15547 441 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 GAGE7O76087 117 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 SORBS2O94875 1100 aaKnown RBP5.42□□□□□ -1.54
BRCA1-224ENST00000497488 H6PDO95479 791 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 TSPAN15O95858 294 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 OPN1LWP04000 364 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 ATP1B1P05026 303 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms