RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 SLC7A13Q8TCU3 470 aa12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 GPR151Q8TDV0 419 aa12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 SGCDQ92629 289 aa12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 HDAC2Q92769 488 aaKnown RBP12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 UBE2FQ969M7 185 aa12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 ZNF501Q96CX3 271 aaPredicted RBP12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 TUBA8Q9NY65 449 aaPredicted RBP12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 SATB2Q9UPW6 733 aa12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 A0A1W2PRQ8 180 aa12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 AGAP5A6NIR3 686 aa12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 GABRA3P34903 492 aa12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 STT3AP46977 705 aa12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 PSG6Q00889 435 aa12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 DGCR6Q14129 220 aa12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 TAGAPQ8N103 731 aa12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 COX18Q8N8Q8 333 aa12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 ADAMTS16Q8TE57 1224 aa12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 GTPBP3Q969Y2 492 aaKnown RBP12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 HRASLS5Q96KN8 279 aa12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 SAP130Q9H0E3 1048 aa12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 KCNE5Q9UJ90 142 aa12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 FBXO4Q9UKT5 387 aa12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 ZNF443Q9Y2A4 671 aaPredicted RBP12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 POFUT2Q9Y2G5 429 aa12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 PCDHGA6Q9Y5G7 932 aa12.73□□□□□ -0.37
SPTBN1-205ENST00000496323 A0A0C4DFX4 3053 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 NKX2-2O95096 273 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 RPS4Y1P22090 263 aaKnown RBP12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 RPS6KA3P51812 740 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 CCL7P80098 99 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 IL5RAQ01344 420 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 ZNF155Q12901 538 aaPredicted RBP12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 ZNF267Q14586 743 aaPredicted RBP12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 GPR68Q15743 365 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 RBM48Q5RL73 367 aaKnown RBP12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 DCST1Q5T197 706 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 EID2Q8N6I1 236 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 TMIGD2Q96BF3 282 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 MVB12AQ96EY5 273 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 VSTM2LQ96N03 204 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 DGAT2Q96PD7 388 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 ADNPQ9H2P0 1102 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 CTPS2Q9NRF8 586 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 FGF21Q9NSA1 209 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 NDOR1Q9UHB4 597 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 DTX4Q9Y2E6 619 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 CACNA1EQ15878 2313 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 SH3PXD2BA1X283 911 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 COQ9O75208 318 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 STX11O75558 287 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 UGT2B17O75795 530 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 TRHRP34981 398 aaPredicted RBP12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 EFNA3P52797 238 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 EEF1A1P68104 462 aaKnown RBP12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 LSM11P83369 360 aaKnown RBP eCLIP12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 HOXC5Q00444 222 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 FIGNL1Q6PIW4 674 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 ZC3H14Q6PJT7 736 aaKnown RBP12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 KLHL17Q6TDP4 642 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 ZNF836Q6ZNA1 936 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 MED25Q71SY5 747 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 ZAR1Q86SH2 424 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 PEX5LQ8IYB4 626 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 PARP8Q8N3A8 854 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 SETD9Q8NE22 299 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 PRRC1Q96M27 445 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 LMF2Q9BU23 707 aaKnown RBP12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 FOLH1BQ9HBA9 442 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 SERTAD3Q9UJW9 196 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 TMCC3Q9ULS5 477 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 IFT52Q9Y366 437 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 HEMK1Q9Y5R4 338 aaPredicted RBP12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 HSPE1-MOB4S4R3N1 261 aa12.72□□□□□ -0.37
SPTBN1-205ENST00000496323 TNRC6BQ9UPQ9 1833 aaKnown RBP12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 SMIM31A0A1B0GVY4 71 aa12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 FAAHO00519 579 aa12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 PEX12O00623 359 aa12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 TOX3O15405 576 aaPredicted RBP12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 KIAA0513O60268 411 aa12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 KCNK2O95069 426 aa12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 CLPSP04118 112 aa12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 RPLP0P05388 317 aaKnown RBP12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 HOXD12P35452 270 aa12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 FUT7Q11130 342 aa12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 AP1ARQ63HQ0 302 aa12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 PGBD2Q6P3X8 592 aa12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 PODNL1Q6PEZ8 512 aa12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 GPR135Q8IZ08 494 aa12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 NLGN4XQ8N0W4 816 aa12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 ZNF619Q8N2I2 560 aa12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 OR4N2Q8NGD1 307 aa12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 APOL4Q9BPW4 351 aa12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 FNDC11Q9BVV2 318 aa12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 RBM38Q9H0Z9 239 aaKnown RBP12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 ZNF556Q9HAH1 456 aa12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 NTNG1Q9Y2I2 539 aa12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 WDFY4Q6ZS81 3184 aa12.71□□□□□ -0.37
SPTBN1-205ENST00000496323 ARID1BQ8NFD5 2236 aaPredicted RBP12.71□□□□□ -0.38
SPTBN1-205ENST00000496323 TP53BP1Q12888 1972 aaPredicted RBP12.71□□□□□ -0.38
SPTBN1-205ENST00000496323 CABIN1Q9Y6J0 2220 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms