RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 ANGPTL4Q9BY76 406 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 ZDHHC11Q9H8X9 412 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 NEUROD4Q9HD90 331 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 EQTNQ9NQ60 294 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 PCDHGB4Q9UN71 923 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 SNX8Q9Y5X2 465 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 GPR45Q9Y5Y3 372 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 A0A1B0GTH9 108 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 PINLYPA6NC86 204 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 EMC8O43402 210 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 GLSO94925 669 aaPredicted RBP15.02■□□□□ -0
SF3A1-209ENST00000496189 KCNH1O95259 989 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 CT45A8P0DMV1 189 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 CT45A9P0DMV2 189 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 SOX18P35713 384 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 KIR3DL1P43629 444 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 MAN2A2P49641 1150 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 PNLIPRP2P54317 469 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 CORO7P57737 925 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 HSF1Q00613 529 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 TOMM20Q15388 145 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 PDCD4Q53EL6 469 aaKnown RBP15.02■□□□□ -0
SF3A1-209ENST00000496189 CT45A2Q5DJT8 189 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 ANXA8L1Q5VT79 327 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 TMEM81Q6P7N7 255 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 BHLHB9Q6PI77 547 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 CDRT4Q8N9R6 151 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 OR8J2Q8NGG1 315 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 OR5P2Q8WZ92 322 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 CHMP6Q96FZ7 201 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 SLC35A4Q96G79 324 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 ADOQ96SZ5 270 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 NPHS2Q9NP85 383 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 CBLCQ9ULV8 474 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 TRIM33Q9UPN9 1127 aa15.02■□□□□ -0
SF3A1-209ENST00000496189 FLNCQ14315 2725 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 OR14I1A6ND48 311 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 PRAMEF25A6NGN4 478 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 E9PBE3 544 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 ANKRD28O15084 1053 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 SUSD5O60279 629 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 HCN1O60741 890 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 SLC22A3O75751 556 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 LDLRP01130 860 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 KRT16P08779 473 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 S100A3P33764 101 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 PRIM2P49643 509 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 SRSF1Q07955 248 aaKnown RBP eCLIP15.01□□□□□ -0.01
SF3A1-209ENST00000496189 LRRC74AQ0VAA2 488 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 FOXO1Q12778 655 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 ZCCHC12Q6PEW1 402 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 Q6ZPB1 254 aaPredicted RBP15.01□□□□□ -0.01
SF3A1-209ENST00000496189 MIER2Q8N344 545 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 OR1J4Q8NGS1 313 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 FAM57AQ8TBR7 257 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 GPR151Q8TDV0 419 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 SLC9A6Q92581 669 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 JADE3Q92613 823 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 MOAP1Q96BY2 351 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 SARAFQ96BY9 339 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 TMEM41AQ96HV5 264 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 ZNF703Q9H7S9 590 aaPredicted RBP15.01□□□□□ -0.01
SF3A1-209ENST00000496189 ZCCHC3Q9NUD5 404 aaKnown RBP15.01□□□□□ -0.01
SF3A1-209ENST00000496189 ZIM2Q9NZV7 527 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 DCTN4Q9UJW0 460 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 ZNF835Q9Y2P0 537 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 ZGRF1Q86YA3 2104 aa15.01□□□□□ -0.01
SF3A1-209ENST00000496189 TRGV5A0A0B4J1U4 118 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 A0A0G2JND7 137 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 BCKDKO14874 412 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 UGT2B11O75310 529 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 TRIM3O75382 744 aaPredicted RBP15□□□□□ -0.01
SF3A1-209ENST00000496189 TRAPPC6AO75865 159 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 SOX30O94993 753 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 PSMG1O95456 288 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 ALOX5P09917 674 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 SOAT1P35610 550 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 RFX3P48380 749 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 CDK9P50750 372 aaKnown RBP15□□□□□ -0.01
SF3A1-209ENST00000496189 SMSP52788 366 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 NME5P56597 212 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 UFM1P61960 85 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 PSG6Q00889 435 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 C3AR1Q16581 482 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 NPSR1Q6W5P4 371 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 OR56A1Q8NGH5 318 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 HGDQ93099 445 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 EFHD2Q96C19 240 aaPredicted RBP15□□□□□ -0.01
SF3A1-209ENST00000496189 THOC1Q96FV9 657 aaKnown RBP15□□□□□ -0.01
SF3A1-209ENST00000496189 EBF4Q9BQW3 602 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 LMF2Q9BU23 707 aaKnown RBP15□□□□□ -0.01
SF3A1-209ENST00000496189 HHATLQ9HCP6 504 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 SDR39U1Q9NRG7 319 aaPredicted RBP15□□□□□ -0.01
SF3A1-209ENST00000496189 SDHAF3Q9NRP4 125 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 PLSCR2Q9NRY7 297 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 FGFR1OP2Q9NVK5 253 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 FAM120CQ9NX05 1096 aaKnown RBP15□□□□□ -0.01
SF3A1-209ENST00000496189 TINAGQ9UJW2 476 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 ACAD8Q9UKU7 415 aa15□□□□□ -0.01
SF3A1-209ENST00000496189 FAF1Q9UNN5 650 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms