RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 OPRM1P35372 400 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 MC3RP41968 323 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 KIR2DL3P43628 341 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 ASCL1P50553 236 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 WNT3P56703 355 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 PSG6Q00889 435 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 SRYQ05066 204 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 ZNF155Q12901 538 aaPredicted RBP11.59□□□□□ -0.55
PTPRF-214ENST00000496043 GAB1Q13480 694 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 KIAA0040Q15053 153 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 ZNHIT3Q15649 155 aaPredicted RBP11.59□□□□□ -0.55
PTPRF-214ENST00000496043 SH2D4BQ5SQS7 431 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 DCST1Q5T197 706 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 CLEC6AQ6EIG7 209 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 OR5M10Q6IEU7 315 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 AAGABQ6PD74 315 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 TMEM107Q6UX40 140 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 TMEM200AQ86VY9 491 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 IFNEQ86WN2 208 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 NAXEQ8NCW5 288 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 OR4N2Q8NGD1 307 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 MBD3L2Q8NHZ7 208 aaPredicted RBP11.59□□□□□ -0.55
PTPRF-214ENST00000496043 RNASE6Q93091 150 aaKnown RBP11.59□□□□□ -0.55
PTPRF-214ENST00000496043 EFHD2Q96C19 240 aaPredicted RBP11.59□□□□□ -0.55
PTPRF-214ENST00000496043 ELP4Q96EB1 424 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 AMDHD1Q96NU7 426 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 DDX18Q9NVP1 670 aaKnown RBP11.59□□□□□ -0.55
PTPRF-214ENST00000496043 FREM3P0C091 2139 aa11.59□□□□□ -0.55
PTPRF-214ENST00000496043 TTC36A6NLP5 189 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 ZIC3O60481 467 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 IL18BPO95998 194 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 FGF4P08620 206 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 POU3F2P20265 443 aaPredicted RBP11.58□□□□□ -0.56
PTPRF-214ENST00000496043 GRK2P25098 689 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 DPP4P27487 766 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 STARP49675 285 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 CLK3P49761 638 aaKnown RBP11.58□□□□□ -0.56
PTPRF-214ENST00000496043 ZNF136P52737 540 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 GAS1P54826 345 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 PSMD4P55036 377 aaKnown RBP11.58□□□□□ -0.56
PTPRF-214ENST00000496043 GFRA1P56159 465 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 DECR1Q16698 335 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 FBXL19-AS1Q494R0 122 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 POMZP3Q6PJE2 187 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 RNF165Q6ZSG1 346 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 Q6ZSR9 355 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 OR2L13Q8N349 312 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 RIBC1Q8N443 379 aaPredicted RBP11.58□□□□□ -0.56
PTPRF-214ENST00000496043 BANPQ8N9N5 519 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 RELL2Q8NC24 303 aaPredicted RBP11.58□□□□□ -0.56
PTPRF-214ENST00000496043 OR4K17Q8NGC6 315 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 RNF138Q8WVD3 245 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 EGLN2Q96KS0 407 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 TUBA1CQ9BQE3 449 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 ROPN1BQ9BZX4 212 aaPredicted RBP11.58□□□□□ -0.56
PTPRF-214ENST00000496043 ANKZF1Q9H8Y5 726 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 ROPN1Q9HAT0 212 aaPredicted RBP11.58□□□□□ -0.56
PTPRF-214ENST00000496043 C3orf14Q9HBI5 128 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 EML4Q9HC35 981 aaKnown RBP11.58□□□□□ -0.56
PTPRF-214ENST00000496043 Q9N2J8 555 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 DKKL1Q9UK85 242 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 FBXL2Q9UKC9 423 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 CBLCQ9ULV8 474 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 FIS1Q9Y3D6 152 aa11.58□□□□□ -0.56
PTPRF-214ENST00000496043 FBN2P35556 2912 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 PDZD2O15018 2839 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 H0Y3Z8 333 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 FADS1O60427 444 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 NPHS1O60500 1241 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 IFI6P09912 130 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 LINC00032P0C843 101 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 NEFHP12036 1026 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 CHMP24386 653 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 TACR1P25103 407 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 ALDH3A1P30838 453 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 GABRA3P34903 492 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 AGFG1P52594 562 aaKnown RBP11.57□□□□□ -0.56
PTPRF-214ENST00000496043 DGKQP52824 942 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 MANFP55145 182 aaKnown RBP11.57□□□□□ -0.56
PTPRF-214ENST00000496043 DSCR4P56555 118 aaPredicted RBP11.57□□□□□ -0.56
PTPRF-214ENST00000496043 EEF1A1P68104 462 aaKnown RBP11.57□□□□□ -0.56
PTPRF-214ENST00000496043 IFFO1Q0D2I5 559 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 SNTB1Q13884 538 aaKnown RBP11.57□□□□□ -0.56
PTPRF-214ENST00000496043 PCLAFQ15004 111 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 BCL2A1Q16548 175 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 EEF1A1P5Q5VTE0 462 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 TRABD2AQ86V40 505 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 KIF18BQ86Y91 864 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 ZZZ3Q8IYH5 903 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 OR2W6PQ8NHA6 318 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 CEP70Q8NHQ1 597 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 WNT2BQ93097 391 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 GFM2Q969S9 779 aaKnown RBP11.57□□□□□ -0.56
PTPRF-214ENST00000496043 SFXN2Q96NB2 322 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 UCN2Q96RP3 112 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 TM9SF2Q99805 663 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 SH3GL2Q99962 352 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 LMF2Q9BU23 707 aaKnown RBP11.57□□□□□ -0.56
PTPRF-214ENST00000496043 DSN1Q9H410 356 aa11.57□□□□□ -0.56
PTPRF-214ENST00000496043 REEP4Q9H6H4 257 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms