RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 CCL21O00585 134 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 DYNC1I1O14576 645 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 CDC40O60508 579 aaKnown RBP eCLIP11.33□□□□□ -0.6
MRPL55-233ENST00000495899 TSPAN2O60636 221 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 HCN1O60741 890 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 UGT2B11O75310 529 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 SOX30O94993 753 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 LAMP1P11279 417 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 ELAVL4P26378 380 aaKnown RBP11.33□□□□□ -0.6
MRPL55-233ENST00000495899 MAGEA5P43359 124 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 PRR5P85299 388 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 OCRLQ01968 901 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 ZNF155Q12901 538 aaPredicted RBP11.33□□□□□ -0.6
MRPL55-233ENST00000495899 LSM12Q3MHD2 195 aaKnown RBP11.33□□□□□ -0.6
MRPL55-233ENST00000495899 VPS26BQ4G0F5 336 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 OGFOD2Q6N063 350 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 ZCCHC12Q6PEW1 402 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 NPSR1Q6W5P4 371 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 FGD2Q7Z6J4 655 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 EID3Q8N140 333 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 KRTCAP2Q8N6L1 136 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 CDRT4Q8N9R6 151 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 PSMA8Q8TAA3 256 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 FAM57AQ8TBR7 257 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 OR5P2Q8WZ92 322 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 ZNF75CPQ92670 426 aaPredicted RBP11.33□□□□□ -0.6
MRPL55-233ENST00000495899 TMEM41AQ96HV5 264 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 PPP1R36Q96LQ0 422 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 ZNF597Q96LX8 424 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 ADOQ96SZ5 270 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 ZNF703Q9H7S9 590 aaPredicted RBP11.33□□□□□ -0.6
MRPL55-233ENST00000495899 METTL7AQ9H8H3 244 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 Q9N2J8 555 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 SUCOQ9UBS9 1254 aaKnown RBP11.33□□□□□ -0.6
MRPL55-233ENST00000495899 ESPL1Q14674 2120 aa11.33□□□□□ -0.6
MRPL55-233ENST00000495899 AQP7O14520 342 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 EMC8O43402 210 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 ICOSLGO75144 302 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 PDE9AO76083 593 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 IL12BP29460 328 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 MAP3K8P41279 467 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 CDK9P50750 372 aaKnown RBP11.32□□□□□ -0.6
MRPL55-233ENST00000495899 PSMD4P55036 377 aaKnown RBP11.32□□□□□ -0.6
MRPL55-233ENST00000495899 DIO3P55073 304 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 HSF1Q00613 529 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 GAB1Q13480 694 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 C3AR1Q16581 482 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 DECR1Q16698 335 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 TTMPQ5BVD1 217 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 TIGD3Q6B0B8 471 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 TRILQ7L0X0 811 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 SPATA19Q7Z5L4 167 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 FJX1Q86VR8 437 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 DOLPP1Q86YN1 238 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 WDR75Q8IWA0 830 aaKnown RBP11.32□□□□□ -0.6
MRPL55-233ENST00000495899 NUP43Q8NFH3 380 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 OR8J2Q8NGG1 315 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 PIWIL2Q8TC59 973 aaKnown RBP11.32□□□□□ -0.6
MRPL55-233ENST00000495899 JSRP1Q96MG2 331 aaPredicted RBP11.32□□□□□ -0.6
MRPL55-233ENST00000495899 MS4A4EQ96PG1 132 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 NODALQ96S42 347 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 DUSP26Q9BV47 211 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 CBLCQ9ULV8 474 aa11.32□□□□□ -0.6
MRPL55-233ENST00000495899 FLNBO75369 2602 aaKnown RBP11.31□□□□□ -0.6
MRPL55-233ENST00000495899 TRGV5A0A0B4J1U4 118 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 PRAMEF25A6NGN4 478 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 E9PLN8 166 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 SDHDO14521 159 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 BCKDKO14874 412 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 NME6O75414 186 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-233ENST00000495899 CBR3O75828 277 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 NKX2-2O95096 273 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 IL33O95760 270 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 HPNP05981 417 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 RFPL3SP0C7P2 107 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 ESRRAP11474 423 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-233ENST00000495899 MASP1P48740 699 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 MAN2A2P49641 1150 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 PRKAG1P54619 331 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 PGS1Q32NB8 556 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 FNDC7Q5VTL7 733 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 BICRALQ6AI39 1079 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 RPTNQ6XPR3 784 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 VPS37AQ8NEZ2 397 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 OR4N2Q8NGD1 307 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 OR1J4Q8NGS1 313 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 RNF138Q8WVD3 245 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 TESCQ96BS2 214 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 MOAP1Q96BY2 351 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 DTNBP1Q96EV8 351 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 C7orf26Q96N11 449 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 GNRHR2Q96P88 292 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 VKORC1Q9BQB6 163 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 OSBPL11Q9BXB4 747 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 DPY30Q9C005 99 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 UBQLN3Q9H347 655 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 LDAHQ9H6V9 325 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 NEUROD4Q9HD90 331 aa11.31□□□□□ -0.6
MRPL55-233ENST00000495899 SIRT3Q9NTG7 399 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-233ENST00000495899 GIN1Q9NXP7 522 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms