RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 EFHD2Q96C19 240 aaPredicted RBP11.11□□□□□ -0.63
CSNK1E-213ENST00000495232 GIMAP5Q96F15 307 aa11.11□□□□□ -0.63
CSNK1E-213ENST00000495232 RMND5BQ96G75 393 aaPredicted RBP11.11□□□□□ -0.63
CSNK1E-213ENST00000495232 C16orf58Q96GQ5 468 aa11.11□□□□□ -0.63
CSNK1E-213ENST00000495232 ITCHQ96J02 903 aa11.11□□□□□ -0.63
CSNK1E-213ENST00000495232 SLC35G5Q96KT7 338 aa11.11□□□□□ -0.63
CSNK1E-213ENST00000495232 JSRP1Q96MG2 331 aaPredicted RBP11.11□□□□□ -0.63
CSNK1E-213ENST00000495232 FRMD6Q96NE9 622 aa11.11□□□□□ -0.63
CSNK1E-213ENST00000495232 TAAR6Q96RI8 345 aa11.11□□□□□ -0.63
CSNK1E-213ENST00000495232 STACQ99469 402 aa11.11□□□□□ -0.63
CSNK1E-213ENST00000495232 DOHHQ9BU89 302 aa11.11□□□□□ -0.63
CSNK1E-213ENST00000495232 TMEM45AQ9NWC5 275 aa11.11□□□□□ -0.63
CSNK1E-213ENST00000495232 KLRF1Q9NZS2 232 aa11.11□□□□□ -0.63
CSNK1E-213ENST00000495232 KLHL14Q9P2G3 628 aa11.11□□□□□ -0.63
CSNK1E-213ENST00000495232 BOKQ9UMX3 212 aaPredicted RBP11.11□□□□□ -0.63
CSNK1E-213ENST00000495232 NTNG1Q9Y2I2 539 aa11.11□□□□□ -0.63
CSNK1E-213ENST00000495232 CHCHD2Q9Y6H1 151 aaPredicted RBP11.11□□□□□ -0.63
CSNK1E-213ENST00000495232 ANKRD33BA6NCL7 494 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 ASPDHA6ND91 283 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 J3QKU1 62 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 NR5A2O00482 541 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 TSPAN2O60636 221 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 SCN2BO60939 215 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 UGT2B11O75310 529 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 NKX2-2O95096 273 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 SNX4O95219 450 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 MATN1P21941 496 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 PIGAP37287 484 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 RFC3P40938 356 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 MASP1P48740 699 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 DNASE1L1P49184 302 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 CLK3P49761 638 aaKnown RBP11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 IGFBP7Q16270 282 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 DUSP5Q16690 384 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 C6orf10Q5SRN2 563 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 CPLX4Q7Z7G2 160 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 SLC22A16Q86VW1 577 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 ZFP62Q8NB50 900 aaPredicted RBP11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 SLC16A11Q8NCK7 471 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 GOT1L1Q8NHS2 421 aaPredicted RBP11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 NR4A3Q92570 626 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 VPS33AQ96AX1 596 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 MIB2Q96AX9 1013 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 SPDL1Q96EA4 605 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 SLC35A4Q96G79 324 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 ZNF317Q96PQ6 595 aaPredicted RBP11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 SLC35A5Q9BS91 424 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 G6PC3Q9BUM1 346 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 PIGUQ9H490 435 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 SH2D2AQ9NP31 389 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 DUSP22Q9NRW4 184 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 DEPPQ9NTK1 212 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 GIN1Q9NXP7 522 aa11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 NUP214P35658 2090 aaPredicted RBP11.1□□□□□ -0.63
CSNK1E-213ENST00000495232 ZNF462Q96JM2 2506 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 EML6Q6ZMW3 1958 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 GXYLT2A0PJZ3 443 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 PRAMEF25A6NGN4 478 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 KRT75O95678 551 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 IL33O95760 270 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 AGR2O95994 175 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 GSNP06396 782 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 ACP2P11117 423 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 EDN3P14138 238 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 PLA2G2AP14555 144 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 HPGDP15428 266 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 ATP6V1C1P21283 382 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 CASP3P42574 277 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 ANXA11P50995 505 aaKnown RBP11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 GYS2P54840 703 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 PPIAP62937 165 aaKnown RBP11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 GNGT1P63211 74 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 POU6F2P78424 691 aaPredicted RBP11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 FOXK1P85037 733 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 SNTA1Q13424 505 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 RCAN2Q14206 197 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 KRTCAP3Q53RY4 240 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 ATAD3BQ5T9A4 648 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 CGB2Q6NT52 195 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 SLC30A6Q6NXT4 461 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 BLOC1S3Q6QNY0 202 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 CLEC4FQ8N1N0 589 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 GALNT11Q8NCW6 608 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 HOXB13Q92826 284 aaPredicted RBP11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 HGDQ93099 445 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 OTUB1Q96FW1 271 aaPredicted RBP11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 ZNF597Q96LX8 424 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 BARD1Q99728 777 aaKnown RBP11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 INPP5KQ9BT40 448 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 BTBD2Q9BX70 525 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 OSBPL11Q9BXB4 747 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 ANGPTL4Q9BY76 406 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 TTTY12Q9BZ98 90 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 FAM107BQ9H098 131 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 IL1RL2Q9HB29 575 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 EXD2Q9NVH0 621 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 GPATCH2Q9NW75 528 aa11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 TUBA8Q9NY65 449 aaPredicted RBP11.09□□□□□ -0.63
CSNK1E-213ENST00000495232 B4GALT7Q9UBV7 327 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms