RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 TUBBP07437 444 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 RNASE1P07998 156 aaKnown RBP7.73□□□□□ -1.17
GARNL3-219ENST00000495172 GAAP10253 952 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 FCGR2AP12318 317 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 CPN2P22792 545 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 GRK2P25098 689 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 ADRA1DP25100 572 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 TMED10P49755 219 aaKnown RBP7.73□□□□□ -1.17
GARNL3-219ENST00000495172 NRG3P56975 720 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 RPP38P78345 283 aaKnown RBP7.73□□□□□ -1.17
GARNL3-219ENST00000495172 PRR20EP86478 221 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 PRR20CP86479 221 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 PRR20DP86480 221 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 PRR20BP86481 221 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 PRR20AP86496 221 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 PLIN5Q00G26 463 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 ZNHIT3Q15649 155 aaPredicted RBP7.73□□□□□ -1.17
GARNL3-219ENST00000495172 TAF9Q16594 264 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 PPP1R3AQ16821 1122 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 KCTD19Q17RG1 926 aaPredicted RBP7.73□□□□□ -1.17
GARNL3-219ENST00000495172 PARP6Q2NL67 630 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 LGSNQ5TDP6 509 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 TMEM108Q6UXF1 575 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 REC114Q7Z4M0 266 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 SPATA19Q7Z5L4 167 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 PRUNE1Q86TP1 453 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 LUZP1Q86V48 1076 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 ZNF615Q8N8J6 731 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 OR2L5Q8NG80 312 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 OR56A3Q8NH54 315 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 OR10D3Q8NH80 312 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 RIT1Q92963 219 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 GFM2Q969S9 779 aaKnown RBP7.73□□□□□ -1.17
GARNL3-219ENST00000495172 ZNF775Q96BV0 537 aaPredicted RBP7.73□□□□□ -1.17
GARNL3-219ENST00000495172 MUCL1Q96DR8 90 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 GPR21Q99679 349 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 AIF1LQ9BQI0 150 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 REXO4Q9GZR2 422 aaKnown RBP7.73□□□□□ -1.17
GARNL3-219ENST00000495172 COPS7BQ9H9Q2 264 aaPredicted RBP7.73□□□□□ -1.17
GARNL3-219ENST00000495172 TNFRSF19Q9NS68 423 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 MED11Q9P086 117 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 ZNF69Q9UC07 566 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 OPN4Q9UHM6 478 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 NENFQ9UMX5 172 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 STARD9Q9P2P6 4700 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 TNFSF11O14788 317 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 VAPBO95292 243 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 GUCA1CO95843 209 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 FSHBP01225 129 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 IGFBP1P08833 259 aaPredicted RBP7.72□□□□□ -1.17
GARNL3-219ENST00000495172 BMP4P12644 408 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 SELEP16581 610 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 COMTP21964 271 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 GPX3P22352 226 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 IGHV1-2P23083 117 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 EEFSECP57772 596 aaKnown RBP7.72□□□□□ -1.17
GARNL3-219ENST00000495172 RPS3AP61247 264 aaKnown RBP7.72□□□□□ -1.17
GARNL3-219ENST00000495172 PLCXD2Q0VAA5 305 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 STX5Q13190 355 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 SPRED3Q2MJR0 410 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 C18orf21Q32NC0 220 aaPredicted RBP7.72□□□□□ -1.17
GARNL3-219ENST00000495172 CCDC181Q5TID7 509 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 AADACL2Q6P093 401 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 RBMS3Q6XE24 437 aaKnown RBP7.72□□□□□ -1.17
GARNL3-219ENST00000495172 CENPUQ71F23 418 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 DOK3Q7L591 496 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 NUP54Q7Z3B4 507 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 OR4K17Q8NGC6 315 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 OR52B6Q8NGF0 335 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 OR51F2Q8NH61 342 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 SLC35G2Q8TBE7 412 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 CD200R1Q8TD46 325 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 EEF1AKMT1Q8WVE0 214 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 ITPAQ9BY32 194 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 RTN4RQ9BZR6 473 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 KCNF1Q9H3M0 494 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 TMEM185BQ9H7F4 350 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 NTN4Q9HB63 628 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 GP6Q9HCN6 339 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 MYNNQ9NPC7 610 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.72□□□□□ -1.17
GARNL3-219ENST00000495172 DDX56Q9NY93 547 aaKnown RBP7.72□□□□□ -1.17
GARNL3-219ENST00000495172 UVRAGQ9P2Y5 699 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 KIAA1109Q2LD37 5005 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 ABCA13Q86UQ4 5058 aa7.72□□□□□ -1.17
GARNL3-219ENST00000495172 MDFIC2A0A1B0GVS7 189 aa7.71□□□□□ -1.18
GARNL3-219ENST00000495172 OR6C76A6NM76 312 aa7.71□□□□□ -1.18
GARNL3-219ENST00000495172 APOC4-APOC2K7ER74 178 aa7.71□□□□□ -1.18
GARNL3-219ENST00000495172 SCO2O43819 266 aa7.71□□□□□ -1.18
GARNL3-219ENST00000495172 RAD51DO75771 328 aa7.71□□□□□ -1.18
GARNL3-219ENST00000495172 GPANK1O95872 356 aa7.71□□□□□ -1.18
GARNL3-219ENST00000495172 APOC2P02655 101 aa7.71□□□□□ -1.18
GARNL3-219ENST00000495172 EPB42P16452 691 aa7.71□□□□□ -1.18
GARNL3-219ENST00000495172 ZNF17P17021 662 aa7.71□□□□□ -1.18
GARNL3-219ENST00000495172 ATP5A1P25705 553 aaKnown RBP7.71□□□□□ -1.18
GARNL3-219ENST00000495172 GPC1P35052 558 aa7.71□□□□□ -1.18
GARNL3-219ENST00000495172 GAS1P54826 345 aa7.71□□□□□ -1.18
GARNL3-219ENST00000495172 SESN2P58004 480 aaPredicted RBP7.71□□□□□ -1.18
GARNL3-219ENST00000495172 LMO4P61968 165 aa7.71□□□□□ -1.18
GARNL3-219ENST00000495172 SNRPD2P62316 118 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms