RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	HHATL	Q9HCP6	504 aa		9.38	□□□□□ -0.91
NEPRO-222	ENST00000494891	ATP6V1H	Q9UI12	483 aa		9.38	□□□□□ -0.91
NEPRO-222	ENST00000494891	HAO1	Q9UJM8	370 aa		9.38	□□□□□ -0.91
NEPRO-222	ENST00000494891	ABCG2	Q9UNQ0	655 aa		9.38	□□□□□ -0.91
NEPRO-222	ENST00000494891	WIF1	Q9Y5W5	379 aa		9.38	□□□□□ -0.91
NEPRO-222	ENST00000494891	PTGDR2	Q9Y5Y4	395 aa		9.38	□□□□□ -0.91
NEPRO-222	ENST00000494891	CREBBP	Q92793	2442 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	CD8B2	A6NJW9	211 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	C19orf84	I3L1E1	186 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	PIP5K1B	O14986	540 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	PDPK1	O15530	556 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	CTIF	O43310	598 aa	Known RBP	9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	FADS1	O60427	444 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	SPAG7	O75391	227 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	LYPLA1	O75608	230 aa	Predicted RBP	9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	REM1	O75628	298 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	SOX30	O94993	753 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	LRAT	O95237	230 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	IL33	O95760	270 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	LINC00032	P0C843	101 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	PRPS2	P11908	318 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	BCKDHA	P12694	445 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	PRF1	P14222	555 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	MSX1	P28360	303 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	MAPK1	P28482	360 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	LCN1	P31025	176 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	CEACAM8	P31997	349 aa	Predicted RBP	9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	KRT20	P35900	424 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	RPL3	P39023	403 aa	Known RBP	9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	ZFP36L2	P47974	494 aa	Known RBP	9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	SERPINB4	P48594	390 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	KRT71	Q3SY84	523 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	EXOSC6	Q5RKV6	272 aa	Known RBP	9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	SH2D4B	Q5SQS7	431 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	ZNF585A	Q6P3V2	769 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	TMEM107	Q6UX40	140 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	ANGPTL8	Q6UXH0	198 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	LARP4	Q71RC2	724 aa	Known RBP eCLIP	9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	R3HCC1L	Q7Z5L2	792 aa	Known RBP	9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	ADGRE4P	Q86SQ3	457 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	EXOC3L1	Q86VI1	746 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	PLCZ1	Q86YW0	608 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	LACC1	Q8IV20	430 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	SLC44A2	Q8IWA5	706 aa	Predicted RBP	9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	MCEMP1	Q8IX19	187 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	LRRC34	Q8IZ02	419 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	FAM83F	Q8NEG4	500 aa	Predicted RBP	9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	OR5M9	Q8NGP3	310 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	CEP70	Q8NHQ1	597 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	ZFP28	Q8NHY6	868 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	PSMA8	Q8TAA3	256 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	ZPLD1	Q8TCW7	415 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	JSRP1	Q96MG2	331 aa	Predicted RBP	9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	ADO	Q96SZ5	270 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	EXO5	Q9H790	373 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	SLC24A3	Q9HC58	644 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891		Q9N2J8	555 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	KCNJ16	Q9NPI9	418 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	DDX18	Q9NVP1	670 aa	Known RBP	9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	ASIC5	Q9NY37	505 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	KLRF1	Q9NZS2	232 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	ZDHHC2	Q9UIJ5	367 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	MRTO4	Q9UKD2	239 aa	Known RBP	9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	CBLC	Q9ULV8	474 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	CSMD1	Q96PZ7	3565 aa		9.37	□□□□□ -0.91
NEPRO-222	ENST00000494891	OTOG	Q6ZRI0	2925 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	IGLV3-32	A0A0A0MS00	114 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891		A0A0G2JNJ9	132 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	HSPB2	A8KAH6	182 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	TMEM233	B4DJY2	109 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	RGS16	O15492	202 aa	Predicted RBP	9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	NKX2-2	O95096	273 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	SERPINE1	P05121	402 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	NGFR	P08138	427 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	BMP7	P18075	431 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	CHM	P24386	653 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	GRK2	P25098	689 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	IL12B	P29460	328 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	SSTR2	P30874	369 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	SRD5A2	P31213	254 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	PSMD4	P55036	377 aa	Known RBP	9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	GFRA1	P56159	465 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	RPL38	P63173	70 aa	Known RBP	9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	GANAB	Q14697	944 aa	Known RBP	9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	ZNHIT3	Q15649	155 aa	Predicted RBP	9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	HSPB2	Q16082	182 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	DECR1	Q16698	335 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	SLC25A35	Q3KQZ1	300 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	VPS26B	Q4G0F5	336 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	ACSF3	Q4G176	576 aa	Predicted RBP	9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	ZNF385B	Q569K4	471 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	C6orf136	Q5SQH8	315 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	NSUN5P2	Q63ZY6	315 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	DESI1	Q6ICB0	168 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	ZCCHC23	Q6ZST2	131 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	SEM1	Q6ZVN7	128 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	CAMKMT	Q7Z624	323 aa		9.36	□□□□□ -0.91
NEPRO-222	ENST00000494891	NUDCD3	Q8IVD9	361 aa		9.36	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms