RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 CCNA2P20248 432 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 RFC2P35250 354 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 MFAP2P55001 183 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 GMFBP60983 142 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 GAMTQ14353 236 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 HAGHQ16775 308 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 C14orf28Q4W4Y0 310 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 EIPR1Q53HC9 387 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 TOR1AIP1Q5JTV8 583 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 IL23RQ5VWK5 629 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 MOB2Q70IA6 237 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 TMUB2Q71RG4 321 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 ZSCAN30Q86W11 494 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 LRRC49Q8IUZ0 686 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 PHC2Q8IXK0 858 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 LHX4Q969G2 390 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 NTNG2Q96CW9 530 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 ST6GALNAC5Q9BVH7 336 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 GPR174Q9BXC1 333 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 NGBQ9NPG2 151 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 ESM1Q9NQ30 184 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 YAE1D1Q9NRH1 226 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 GDAP2Q9NXN4 497 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 EMCNQ9ULC0 261 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 RNF24Q9Y225 148 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 MRPL11Q9Y3B7 192 aaKnown RBP3.49□□□□□ -1.85
SMC4-224ENST00000494612 CLCA3PQ9Y6N3 262 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 PTPRUQ92729 1446 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 NCOA3Q9Y6Q9 1424 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 ASXL1Q8IXJ9 1541 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 MYO5BQ9ULV0 1848 aa3.49□□□□□ -1.85
SMC4-224ENST00000494612 LRP5O75197 1615 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 NHSL1Q5SYE7 1610 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 ABCC4O15439 1325 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 ERBINQ96RT1 1412 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 SETD5Q9C0A6 1442 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 TRAV9-2A0A087WT02 112 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 BCLAF3A2AJT9 711 aaKnown RBP3.48□□□□□ -1.85
SMC4-224ENST00000494612 FOXI3A8MTJ6 420 aaPredicted RBP3.48□□□□□ -1.85
SMC4-224ENST00000494612 SH3BGRLO75368 114 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 PDE5AO76074 875 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 ECDO95905 644 aaPredicted RBP3.48□□□□□ -1.85
SMC4-224ENST00000494612 GOT2P00505 430 aaKnown RBP3.48□□□□□ -1.85
SMC4-224ENST00000494612 HPP00738 406 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 RALAP11233 206 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 FUT1P19526 365 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 CHRNA3P32297 505 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 BRCC3P46736 316 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 CSRP3P50461 194 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 VCPP55072 806 aaKnown RBP3.48□□□□□ -1.85
SMC4-224ENST00000494612 BPIFB3P59826 476 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 SRYQ05066 204 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 SPP2Q13103 211 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 ZNF699Q32M78 642 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 RAET1GQ6H3X3 334 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 IRGCQ6NXR0 463 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 PNCKQ6P2M8 343 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 CEACAM19Q7Z692 300 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 LYG1Q8N1E2 194 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 HDDC3Q8N4P3 179 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 CSNK1G2-AS1Q8NCQ2 148 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 WDR36Q8NI36 951 aaKnown RBP3.48□□□□□ -1.85
SMC4-224ENST00000494612 MCCC1Q96RQ3 725 aaPredicted RBP3.48□□□□□ -1.85
SMC4-224ENST00000494612 CPXM1Q96SM3 734 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 NDUFAF3Q9BU61 184 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 HSD3B7Q9H2F3 369 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 FAM124BQ9H5Z6 455 aaPredicted RBP3.48□□□□□ -1.85
SMC4-224ENST00000494612 ROPN1Q9HAT0 212 aaPredicted RBP3.48□□□□□ -1.85
SMC4-224ENST00000494612 ABCC13Q9NSE7 274 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 BCAP29Q9UHQ4 241 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 FZR1Q9UM11 496 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 GCC2Q8IWJ2 1684 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 EP400Q96L91 3159 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 PNPLA6Q8IY17 1366 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 KIF15Q9NS87 1388 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 PLEKHG1Q9ULL1 1385 aa3.48□□□□□ -1.85
SMC4-224ENST00000494612 CACNA1FO60840 1977 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 RIMS2Q9UQ26 1411 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 ZNF487B1APH4 448 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 SAP18O00422 153 aaKnown RBP3.47□□□□□ -1.85
SMC4-224ENST00000494612 RASGRF2O14827 1237 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 SSX5O60225 188 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 NUDT14O95848 222 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 PDGFBP01127 241 aaPredicted RBP3.47□□□□□ -1.85
SMC4-224ENST00000494612 GP9P14770 177 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 IDSP22304 550 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 SLC6A8P48029 635 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 PGFP49763 221 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 ARHGDIAP52565 204 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 HMGCS2P54868 508 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 NAAAQ02083 359 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 BNIP1Q12981 228 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 LTB4RQ15722 352 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 BEND6Q5SZJ8 279 aaPredicted RBP3.47□□□□□ -1.85
SMC4-224ENST00000494612 TAF3Q5VWG9 929 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 FAM159AQ6UWV7 190 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 RBM43Q6ZSC3 357 aaKnown RBP3.47□□□□□ -1.85
SMC4-224ENST00000494612 ERASQ7Z444 233 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 NAXDQ8IW45 347 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms