RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 LCE1AQ5T7P2 110 aa5.05□□□□□ -1.6
SMC2-205ENST00000493955 PRR5LQ6MZQ0 368 aa5.05□□□□□ -1.6
SMC2-205ENST00000493955 APOOLQ6UXV4 268 aa5.05□□□□□ -1.6
SMC2-205ENST00000493955 HACD2Q6Y1H2 254 aa5.05□□□□□ -1.6
SMC2-205ENST00000493955 STOX1Q6ZVD7 989 aa5.05□□□□□ -1.6
SMC2-205ENST00000493955 FAM133AQ8N9E0 248 aa5.05□□□□□ -1.6
SMC2-205ENST00000493955 STEAP2Q8NFT2 490 aa5.05□□□□□ -1.6
SMC2-205ENST00000493955 PNPT1Q8TCS8 783 aaKnown RBP5.05□□□□□ -1.6
SMC2-205ENST00000493955 LRRC15Q8TF66 581 aa5.05□□□□□ -1.6
SMC2-205ENST00000493955 SHC3Q92529 594 aa5.05□□□□□ -1.6
SMC2-205ENST00000493955 GTF3AQ92664 365 aaKnown RBP5.05□□□□□ -1.6
SMC2-205ENST00000493955 N4BP2L2Q92802 583 aaPredicted RBP5.05□□□□□ -1.6
SMC2-205ENST00000493955 SENP8Q96LD8 212 aa5.05□□□□□ -1.6
SMC2-205ENST00000493955 GPN2Q9H9Y4 310 aaPredicted RBP5.05□□□□□ -1.6
SMC2-205ENST00000493955 ADGRL4Q9HBW9 690 aa5.05□□□□□ -1.6
SMC2-205ENST00000493955 ZDHHC18Q9NUE0 388 aa5.05□□□□□ -1.6
SMC2-205ENST00000493955 SMPD3Q9NY59 655 aaPredicted RBP5.05□□□□□ -1.6
SMC2-205ENST00000493955 NUDT4Q9NZJ9 180 aa5.05□□□□□ -1.6
SMC2-205ENST00000493955 ZNF346Q9UL40 294 aaKnown RBP5.05□□□□□ -1.6
SMC2-205ENST00000493955 MAB21L2Q9Y586 359 aa5.05□□□□□ -1.6
SMC2-205ENST00000493955 SALL1Q9NSC2 1324 aa5.05□□□□□ -1.6
SMC2-205ENST00000493955 PPIAL4CA0A0B4J2A2 164 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 TRIM64CA6NLI5 447 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 CTAGE5O15320 804 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 ZG16O60844 167 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 PPIAL4GP0DN37 164 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 ANXA3P12429 323 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 HSD17B1P14061 328 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 CHI3L1P36222 383 aaPredicted RBP5.04□□□□□ -1.6
SMC2-205ENST00000493955 SLC1A4P43007 532 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 CRIP2P52943 208 aaPredicted RBP5.04□□□□□ -1.6
SMC2-205ENST00000493955 METAP1P53582 386 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 HMGN5P82970 282 aaKnown RBP5.04□□□□□ -1.6
SMC2-205ENST00000493955 SIX1Q15475 284 aaPredicted RBP5.04□□□□□ -1.6
SMC2-205ENST00000493955 RABGAP1LQ5R372 815 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 SPATA46Q5T0L3 261 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 CENPPQ6IPU0 288 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 BLOC1S2Q6QNY1 142 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 RPAINQ86UA6 219 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 PRSS33Q8NF86 280 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 OR2T3Q8NH03 318 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 RAET1EQ8TD07 263 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 RLN3Q8WXF3 142 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 TAF15Q92804 592 aaKnown RBP eCLIP5.04□□□□□ -1.6
SMC2-205ENST00000493955 ART4Q93070 314 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 DHTKD1Q96HY7 919 aaPredicted RBP5.04□□□□□ -1.6
SMC2-205ENST00000493955 SLC45A3Q96JT2 553 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 RPP25Q9BUL9 199 aaKnown RBP5.04□□□□□ -1.6
SMC2-205ENST00000493955 ASIC3Q9UHC3 531 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 SPATA2Q9UM82 520 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 EIF3LQ9Y262 564 aaKnown RBP5.04□□□□□ -1.6
SMC2-205ENST00000493955 EXOSC1Q9Y3B2 195 aaKnown RBP5.04□□□□□ -1.6
SMC2-205ENST00000493955 OR10H1Q9Y4A9 318 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 KIF16BQ96L93 1317 aa5.04□□□□□ -1.6
SMC2-205ENST00000493955 GSAPA4D1B5 854 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 MFSD2BA6NFX1 497 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 ASB14A6NK59 587 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 SOCS3O14543 225 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 TM7SF2O76062 418 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 NUDT14O95848 222 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 OPN1MWP04001 364 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 HOXB7P09629 217 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 OPN1MW2P0DN77 364 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 OPN1MW3P0DN78 364 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 PDHBP11177 359 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 OXTRP30559 389 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 SPRP35270 261 aaPredicted RBP5.03□□□□□ -1.6
SMC2-205ENST00000493955 RGS4P49798 205 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 STK19P49842 368 aaPredicted RBP5.03□□□□□ -1.6
SMC2-205ENST00000493955 ATP12AP54707 1039 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 SELPLGQ14242 412 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 MAJINQ3KP22 176 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 CYBRD1Q53TN4 286 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 ACER2Q5QJU3 275 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.03□□□□□ -1.6
SMC2-205ENST00000493955 DPY19L4Q7Z388 723 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 CATSPER3Q86XQ3 398 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 ZNF491Q8N8L2 437 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 RAB3CQ96E17 227 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 POM121L2Q96KW2 1035 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 ATF6BQ99941 703 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 MCRIP2Q9BUT9 160 aaKnown RBP5.03□□□□□ -1.6
SMC2-205ENST00000493955 RNF41Q9H4P4 317 aaPredicted RBP5.03□□□□□ -1.6
SMC2-205ENST00000493955 RBM28Q9NW13 759 aaKnown RBP5.03□□□□□ -1.6
SMC2-205ENST00000493955 RABL2BQ9UNT1 228 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 CPQQ9Y646 472 aa5.03□□□□□ -1.6
SMC2-205ENST00000493955 C15orf38-AP3S2A0A0A6YYH1 394 aa5.02□□□□□ -1.61
SMC2-205ENST00000493955 TEX48A0A1B0GUV7 120 aa5.02□□□□□ -1.61
SMC2-205ENST00000493955 MBLAC1A4D2B0 266 aaPredicted RBP5.02□□□□□ -1.61
SMC2-205ENST00000493955 CASKO14936 926 aa5.02□□□□□ -1.61
SMC2-205ENST00000493955 LINC01565O15544 149 aa5.02□□□□□ -1.61
SMC2-205ENST00000493955 DUX1O43812 170 aa5.02□□□□□ -1.61
SMC2-205ENST00000493955 BCAS1O75363 584 aaPredicted RBP5.02□□□□□ -1.61
SMC2-205ENST00000493955 POP4O95707 220 aaKnown RBP5.02□□□□□ -1.61
SMC2-205ENST00000493955 IGKV3-20P01619 116 aa5.02□□□□□ -1.61
SMC2-205ENST00000493955 MT-ND1P03886 318 aa5.02□□□□□ -1.61
SMC2-205ENST00000493955 CAPGP40121 348 aa5.02□□□□□ -1.61
SMC2-205ENST00000493955 ATP4BP51164 291 aa5.02□□□□□ -1.61
SMC2-205ENST00000493955 CBX1P83916 185 aa5.02□□□□□ -1.61
SMC2-205ENST00000493955 RAB35Q15286 201 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms