RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 CCNL2Q96S94 520 aaPredicted RBP12.91□□□□□ -0.34
TRIM11-204ENST00000493030 CUEDC1Q9NWM3 386 aaPredicted RBP12.91□□□□□ -0.34
TRIM11-204ENST00000493030 HIF3AQ9Y2N7 669 aa12.91□□□□□ -0.34
TRIM11-204ENST00000493030 PRAMEF26H0Y7S4 382 aa12.91□□□□□ -0.34
TRIM11-204ENST00000493030 IFNA2P01563 188 aa12.91□□□□□ -0.34
TRIM11-204ENST00000493030 IFNGR1P15260 489 aa12.91□□□□□ -0.34
TRIM11-204ENST00000493030 AKR1C4P17516 323 aa12.91□□□□□ -0.34
TRIM11-204ENST00000493030 CD40LGP29965 261 aa12.91□□□□□ -0.34
TRIM11-204ENST00000493030 PRAMEF8Q5VWM4 474 aa12.91□□□□□ -0.34
TRIM11-204ENST00000493030 PRAMEF7Q5VXH5 474 aa12.91□□□□□ -0.34
TRIM11-204ENST00000493030 TRIM46Q7Z4K8 759 aa12.91□□□□□ -0.34
TRIM11-204ENST00000493030 CNIH4Q9P003 139 aa12.91□□□□□ -0.34
TRIM11-204ENST00000493030 CXXC1Q9P0U4 656 aaPredicted RBP12.91□□□□□ -0.34
TRIM11-204ENST00000493030 YY2O15391 372 aa12.91□□□□□ -0.34
TRIM11-204ENST00000493030 GABBR2O75899 941 aa12.91□□□□□ -0.34
TRIM11-204ENST00000493030 SNTB2Q13425 540 aaKnown RBP12.91□□□□□ -0.34
TRIM11-204ENST00000493030 PIN1Q13526 163 aaPredicted RBP12.91□□□□□ -0.34
TRIM11-204ENST00000493030 TRAPPC6BQ86SZ2 158 aa12.91□□□□□ -0.34
TRIM11-204ENST00000493030 ABCG5Q9H222 651 aa12.91□□□□□ -0.34
TRIM11-204ENST00000493030 ERVK13-1Q9NX77 482 aa12.91□□□□□ -0.34
TRIM11-204ENST00000493030 MYEF2Q9P2K5 600 aaKnown RBP12.91□□□□□ -0.34
TRIM11-204ENST00000493030 TCHHQ07283 1943 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 AGAP5A6NIR3 686 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 G3V2L1 256 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 SLC1A7O00341 560 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 ADAP00813 363 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 PITPNBP48739 271 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 WDR5P61964 334 aaKnown RBP12.9□□□□□ -0.34
TRIM11-204ENST00000493030 RAB11BQ15907 218 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 ZNF423Q2M1K9 1284 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 AWAT2Q6E213 333 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 ARHGAP12Q8IWW6 846 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 SLC39A11Q8N1S5 342 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 NEIL2Q969S2 332 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 LMF1Q96S06 567 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 RNF38Q9H0F5 515 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 UBE2J1Q9Y385 318 aaPredicted RBP12.9□□□□□ -0.34
TRIM11-204ENST00000493030 MAB21L2Q9Y586 359 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 EIF3FO00303 357 aaPredicted RBP12.9□□□□□ -0.34
TRIM11-204ENST00000493030 NME4O00746 187 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 FOXD2O60548 495 aaPredicted RBP12.9□□□□□ -0.34
TRIM11-204ENST00000493030 ITGB7P26010 798 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 LSSP48449 732 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 PRKXP51817 358 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 RHEBQ15382 184 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 CYB561A3Q8NBI2 242 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 RCBTB1Q8NDN9 531 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 OR9Q2Q8NGE9 314 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 TOE1Q96GM8 510 aaKnown RBP12.9□□□□□ -0.34
TRIM11-204ENST00000493030 OR5B2Q96R09 309 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 MYO9BQ13459 2157 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 CAPN3P20807 821 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 PTGER1P34995 402 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 SOX9P48436 509 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 ART1P52961 327 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 FOXA1P55317 472 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 CLDN10P78369 228 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 SERTAD2Q14140 314 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 TMEM173Q86WV6 379 aaPredicted RBP12.9□□□□□ -0.34
TRIM11-204ENST00000493030 NPRL2Q8WTW4 380 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 PDLIM7Q9NR12 457 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 ENPP4Q9Y6X5 453 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 BAZ2AQ9UIF9 1905 aaKnown RBP12.9□□□□□ -0.34
TRIM11-204ENST00000493030 NPIPA5A0A0B4J1W7 369 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 GRXCR2A6NFK2 248 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 NPIPA7E9PJI5 369 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 PHYHO14832 338 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 FRS3O43559 492 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 RAD1O60671 282 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 JRKO75564 520 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 IFNA5P01569 189 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 H2AFB2P0C5Z0 115 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 NPIPA8P0DM63 369 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 FOLR3P41439 243 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 HNRNPA1L2Q32P51 320 aaKnown RBP12.9□□□□□ -0.34
TRIM11-204ENST00000493030 C3orf58Q8NDZ4 430 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 SFXN2Q96NB2 322 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 CASD1Q96PB1 797 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 ARMC1Q9NVT9 282 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 MGAT4CQ9UBM8 478 aa12.9□□□□□ -0.34
TRIM11-204ENST00000493030 GJE1A6NN92 205 aa12.9□□□□□ -0.35
TRIM11-204ENST00000493030 SNNO75324 88 aaPredicted RBP12.9□□□□□ -0.35
TRIM11-204ENST00000493030 C7P10643 843 aa12.9□□□□□ -0.35
TRIM11-204ENST00000493030 COL28A1Q2UY09 1125 aa12.9□□□□□ -0.35
TRIM11-204ENST00000493030 PIANPQ8IYJ0 282 aa12.9□□□□□ -0.35
TRIM11-204ENST00000493030 FRS2Q8WU20 508 aa12.9□□□□□ -0.35
TRIM11-204ENST00000493030 RLN3Q8WXF3 142 aa12.9□□□□□ -0.35
TRIM11-204ENST00000493030 FGF13Q92913 245 aa12.9□□□□□ -0.35
TRIM11-204ENST00000493030 PCDH10Q9P2E7 1040 aa12.9□□□□□ -0.35
TRIM11-204ENST00000493030 MBLAC1A4D2B0 266 aaPredicted RBP12.89□□□□□ -0.35
TRIM11-204ENST00000493030 LDB3O75112 727 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 SLC2A5P22732 501 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 LCN8Q6JVE9 175 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 PDZD3Q86UT5 571 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 SCML4Q8N228 414 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 OR5D16Q8NGK9 328 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 OR5AK2Q8NH90 309 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 TCEAL4Q96EI5 215 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 MAP3K3Q99759 626 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 NMNAT1Q9HAN9 279 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms