RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	GOLGA8M	H3BSY2	632 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	PGRMC1	O00264	195 aa	Known RBP	4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	SS18L1	O75177	396 aa	Predicted RBP	4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	PRSS23	O95084	383 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	ADA	P00813	363 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	RHOXF2B	P0C7M4	288 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	DHRS4L1	P0CG22	281 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	MPC1L	P0DKB6	136 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	HOXB1	P14653	301 aa	Predicted RBP	4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	KRT15	P19012	456 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	AHR	P35869	848 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	STT3A	P46977	705 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	SLC6A8	P48029	635 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	LIM2	P55344	173 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	NRG3	P56975	720 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	RPS3A	P61247	264 aa	Known RBP	4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	RPS13	P62277	151 aa	Known RBP	4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	HERVK_113	P63132	956 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	ERVK-8	P63133	956 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	TGM3	Q08188	693 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	BAMBI	Q13145	260 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	NAE1	Q13564	534 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	CUL1	Q13616	776 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	CSHL1	Q14406	222 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	GBX1	Q14549	363 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	EFTUD2	Q15029	972 aa	Known RBP eCLIP	4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	ACAP2	Q15057	778 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	TRIP13	Q15645	432 aa	Predicted RBP	4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	ZNHIT3	Q15649	155 aa	Predicted RBP	4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	SAMD5	Q5TGI4	173 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	ZNF470	Q6ECI4	717 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	HIST2H2AA3	Q6FI13	130 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	DESI1	Q6ICB0	168 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	SLC30A6	Q6NXT4	461 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	CCDC137	Q6PK04	289 aa	Known RBP	4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	LCTL	Q6UWM7	567 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	TMEM108	Q6UXF1	575 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	RNF111	Q6ZNA4	994 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	MBOAT1	Q6ZNC8	495 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	DGAT2L6	Q6ZPD8	337 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	UBE2R2	Q712K3	238 aa	Predicted RBP	4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	BHLHA15	Q7RTS1	189 aa	Predicted RBP	4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	C1QL2	Q7Z5L3	287 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	STRA8	Q7Z7C7	330 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	PLCZ1	Q86YW0	608 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	TMEM139	Q8IV31	216 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	OR4N5	Q8IXE1	308 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	PPIL6	Q8IXY8	311 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	GABRG1	Q8N1C3	465 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	ANKRD53	Q8N9V6	530 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	BBOF1	Q8ND07	529 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	TRPV3	Q8NET8	790 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	ABHD11	Q8NFV4	315 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	OR4K1	Q8NGD4	311 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	NANP	Q8TBE9	248 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	RNF217	Q8TC41	542 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	KCNJ9	Q92806	393 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	SLC25A28	Q96A46	364 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	LRRC58	Q96CX6	371 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	MUCL1	Q96DR8	90 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	MFSD3	Q96ES6	412 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	RBM18	Q96H35	190 aa	Known RBP	4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	FBXL20	Q96IG2	436 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	BIRC8	Q96P09	236 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	USB1	Q9BQ65	265 aa	Known RBP	4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	ERVK-6	Q9BXR3	956 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	AICDA	Q9GZX7	198 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	SPNS1	Q9H2V7	528 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	ZMAT3	Q9HA38	289 aa	Known RBP	4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	PARVB	Q9HBI1	364 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	SMYD2	Q9NRG4	433 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	SNX15	Q9NRS6	342 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	NSMCE4A	Q9NXX6	385 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	NPAP1	Q9NZP6	1156 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	ASIC3	Q9UHC3	531 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	FBXL2	Q9UKC9	423 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	DAPP1	Q9UN19	280 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	MGAT4B	Q9UQ53	548 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	ERVK-19	Q9WJR5	959 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	MED16	Q9Y2X0	877 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	DHRS7	Q9Y394	339 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	MMP24	Q9Y5R2	645 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	ATP23	Q9Y6H3	246 aa		4.73	□□□□□ -1.65
SEC13-219	ENST00000492602	EFCAB8	A8MWE9	144 aa		4.72	□□□□□ -1.65
SEC13-219	ENST00000492602		H3BML4	177 aa		4.72	□□□□□ -1.65
SEC13-219	ENST00000492602	ERI3	O43414	337 aa	Known RBP	4.72	□□□□□ -1.65
SEC13-219	ENST00000492602	FRS3	O43559	492 aa		4.72	□□□□□ -1.65
SEC13-219	ENST00000492602	ZIC3	O60481	467 aa		4.72	□□□□□ -1.65
SEC13-219	ENST00000492602	SLU7	O95391	586 aa	Known RBP	4.72	□□□□□ -1.65
SEC13-219	ENST00000492602	S100B	P04271	92 aa	Predicted RBP	4.72	□□□□□ -1.65
SEC13-219	ENST00000492602	RNASE1	P07998	156 aa	Known RBP	4.72	□□□□□ -1.65
SEC13-219	ENST00000492602	ABCB1	P08183	1280 aa	Predicted RBP	4.72	□□□□□ -1.65
SEC13-219	ENST00000492602	SERPINA6	P08185	405 aa		4.72	□□□□□ -1.65
SEC13-219	ENST00000492602	DAO	P14920	347 aa		4.72	□□□□□ -1.65
SEC13-219	ENST00000492602	IFNGR1	P15260	489 aa		4.72	□□□□□ -1.65
SEC13-219	ENST00000492602	NPPB	P16860	134 aa		4.72	□□□□□ -1.65
SEC13-219	ENST00000492602	DDX5	P17844	614 aa	Known RBP	4.72	□□□□□ -1.65
SEC13-219	ENST00000492602	TCP1	P17987	556 aa	Known RBP	4.72	□□□□□ -1.65
SEC13-219	ENST00000492602	PGC	P20142	388 aa		4.72	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms