RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 SPRP35270 261 aaPredicted RBP11.88□□□□□ -0.51
USF1-206ENST00000491629 KCNJ5P48544 419 aa11.88□□□□□ -0.51
USF1-206ENST00000491629 ALDH18A1P54886 795 aaKnown RBP11.88□□□□□ -0.51
USF1-206ENST00000491629 PHEXP78562 749 aa11.88□□□□□ -0.51
USF1-206ENST00000491629 GALNT1Q10472 559 aaPredicted RBP11.88□□□□□ -0.51
USF1-206ENST00000491629 CCNYL2Q5T2Q4 361 aa11.88□□□□□ -0.51
USF1-206ENST00000491629 C6orf163Q5TEZ5 329 aa11.88□□□□□ -0.51
USF1-206ENST00000491629 STAC2Q6ZMT1 411 aa11.88□□□□□ -0.51
USF1-206ENST00000491629 RAPH1Q70E73 1250 aa11.88□□□□□ -0.51
USF1-206ENST00000491629 ZNF611Q8N823 705 aa11.88□□□□□ -0.51
USF1-206ENST00000491629 OR2M3Q8NG83 312 aa11.88□□□□□ -0.51
USF1-206ENST00000491629 OR4N2Q8NGD1 307 aa11.88□□□□□ -0.51
USF1-206ENST00000491629 OR5M1Q8NGP8 315 aa11.88□□□□□ -0.51
USF1-206ENST00000491629 CAVIN3Q969G5 261 aa11.88□□□□□ -0.51
USF1-206ENST00000491629 TMCO6Q96DC7 493 aa11.88□□□□□ -0.51
USF1-206ENST00000491629 BTBD9Q96Q07 612 aa11.88□□□□□ -0.51
USF1-206ENST00000491629 DSN1Q9H410 356 aa11.88□□□□□ -0.51
USF1-206ENST00000491629 ZBTB26Q9HCK0 441 aa11.88□□□□□ -0.51
USF1-206ENST00000491629 FARSBQ9NSD9 589 aaKnown RBP11.88□□□□□ -0.51
USF1-206ENST00000491629 FLRT3Q9NZU0 649 aa11.88□□□□□ -0.51
USF1-206ENST00000491629 ACOT9Q9Y305 439 aa11.88□□□□□ -0.51
USF1-206ENST00000491629 C1orf226A1L170 272 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 OVOL3O00110 214 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 THBS1P07996 1170 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 CSNK2A2P19784 350 aaPredicted RBP11.87□□□□□ -0.51
USF1-206ENST00000491629 SLC6A8P48029 635 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 TRAF3Q13114 568 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 SLMAPQ14BN4 828 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 PON3Q15166 354 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 CLEC12BQ2HXU8 276 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 ZNF628Q5EBL2 1059 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 BEX5Q5H9J7 111 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 C10orf62Q5T681 223 aaPredicted RBP11.87□□□□□ -0.51
USF1-206ENST00000491629 GRTP1Q5TC63 336 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 FRG2Q64ET8 278 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 DNM1P46Q6ZS02 220 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 C3orf62Q6ZUJ4 267 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 RPS27LQ71UM5 84 aaKnown RBP11.87□□□□□ -0.51
USF1-206ENST00000491629 COMMD6Q7Z4G1 85 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 TBC1D1Q86TI0 1168 aaPredicted RBP11.87□□□□□ -0.51
USF1-206ENST00000491629 HIPK1Q86Z02 1210 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 RAB3IL1Q8TBN0 382 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 CDKL2Q92772 493 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 EFHD2Q96C19 240 aaPredicted RBP11.87□□□□□ -0.51
USF1-206ENST00000491629 KLHL29Q96CT2 875 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 PLPPR2Q96GM1 343 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 VSTM2LQ96N03 204 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 NSUN5Q96P11 429 aaKnown RBP11.87□□□□□ -0.51
USF1-206ENST00000491629 FRG2BQ96QU4 278 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 LRRC1Q9BTT6 524 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 NOL11Q9H8H0 719 aaKnown RBP11.87□□□□□ -0.51
USF1-206ENST00000491629 TXNDC16Q9P2K2 825 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 LAMP3Q9UQV4 416 aa11.87□□□□□ -0.51
USF1-206ENST00000491629 OR2M5A3KFT3 312 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 GOLGA6L10A6NI86 522 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 PPP6CO00743 305 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 SEC14L5O43304 696 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 CLDN9O95484 217 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 C2P06681 752 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 SOD3P08294 240 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 GFAPP14136 432 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 CRABP2P29373 138 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 MAPK12P53778 367 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 DSCR4P56555 118 aaPredicted RBP11.86□□□□□ -0.51
USF1-206ENST00000491629 ZNF844Q08AG5 666 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 EXOC3L2Q2M3D2 409 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 LARP4Q71RC2 724 aaKnown RBP eCLIP11.86□□□□□ -0.51
USF1-206ENST00000491629 FAM214BQ7L5A3 538 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 CTAGE3PQ8IX95 158 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 PPM1NQ8N819 430 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 ZNF675Q8TD23 568 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 TRPC4APQ8TEL6 797 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 KAT2AQ92830 837 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 NTMT1Q9BV86 223 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 REG4Q9BYZ8 158 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 CXorf56Q9H5V9 222 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 PLSCR4Q9NRQ2 329 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 MED11Q9P086 117 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 PRODH2Q9UF12 536 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 PROCRQ9UNN8 238 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 ZNF175Q9Y473 711 aa11.86□□□□□ -0.51
USF1-206ENST00000491629 SYCE1LA8MT33 242 aa11.85□□□□□ -0.51
USF1-206ENST00000491629 SHISA8B8ZZ34 492 aa11.85□□□□□ -0.51
USF1-206ENST00000491629 CD5LO43866 347 aa11.85□□□□□ -0.51
USF1-206ENST00000491629 FADS1O60427 444 aa11.85□□□□□ -0.51
USF1-206ENST00000491629 ABCB7O75027 752 aa11.85□□□□□ -0.51
USF1-206ENST00000491629 NDUFS7O75251 213 aa11.85□□□□□ -0.51
USF1-206ENST00000491629 DANCRP0C864 163 aa11.85□□□□□ -0.51
USF1-206ENST00000491629 HK1P19367 917 aa11.85□□□□□ -0.51
USF1-206ENST00000491629 PNLIPRP2P54317 469 aa11.85□□□□□ -0.51
USF1-206ENST00000491629 VEZF1Q14119 521 aa11.85□□□□□ -0.51
USF1-206ENST00000491629 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.85□□□□□ -0.51
USF1-206ENST00000491629 SGO1Q5FBB7 561 aa11.85□□□□□ -0.51
USF1-206ENST00000491629 PODNL1Q6PEZ8 512 aa11.85□□□□□ -0.51
USF1-206ENST00000491629 CHMP1BQ7LBR1 199 aa11.85□□□□□ -0.51
USF1-206ENST00000491629 GGNQ86UU5 652 aa11.85□□□□□ -0.51
USF1-206ENST00000491629 CCDC116Q8IYX3 515 aa11.85□□□□□ -0.51
USF1-206ENST00000491629 PLD6Q8N2A8 252 aaKnown RBP11.85□□□□□ -0.51
USF1-206ENST00000491629 METTL25Q8N6Q8 603 aa11.85□□□□□ -0.51
USF1-206ENST00000491629 GBP7Q8N8V2 638 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms