RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 NCOR2Q9Y618 2525 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 ELOVL7A1L3X0 281 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 PRORSD1PA6NEY8 169 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 GUSBP08236 651 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 TFPTP0C1Z6 253 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 PGM1P36871 562 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 PSMD4P55036 377 aaKnown RBP17.21■□□□□ 0.35
MCF2L-230ENST00000491028 MRPS22P82650 360 aaKnown RBP17.21■□□□□ 0.35
MCF2L-230ENST00000491028 HPCAP84074 193 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 FUT5Q11128 374 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 CEACAM7Q14002 265 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 ADRM1Q16186 407 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 VMACQ2NL98 169 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 DEFB109BQ30KR1 87 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 PRAMEF8Q5VWM4 474 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 PRAMEF7Q5VXH5 474 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 IFNEQ86WN2 208 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 RPS19BP1Q86WX3 136 aaKnown RBP17.21■□□□□ 0.35
MCF2L-230ENST00000491028 MICU2Q8IYU8 434 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 FAM110BQ8TC76 370 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 PSMF1Q92530 271 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 RMND5BQ96G75 393 aaPredicted RBP17.21■□□□□ 0.35
MCF2L-230ENST00000491028 ZNF354BQ96LW1 612 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 TRNT1Q96Q11 434 aaKnown RBP17.21■□□□□ 0.35
MCF2L-230ENST00000491028 G6PC3Q9BUM1 346 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 CADM1Q9BY67 442 aaKnown RBP17.21■□□□□ 0.35
MCF2L-230ENST00000491028 POLE3Q9NRF9 147 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 CALML5Q9NZT1 146 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 TEKT2Q9UIF3 430 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 YARS2Q9Y2Z4 477 aaKnown RBP17.21■□□□□ 0.35
MCF2L-230ENST00000491028 KCNMB2Q9Y691 235 aa17.21■□□□□ 0.35
MCF2L-230ENST00000491028 GXYLT2A0PJZ3 443 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 ERICH4A6NGS2 130 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 A8MUI8 341 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 C5orf58C9J3I9 102 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 TAF4O00268 1085 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 WWP2O00308 870 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 CDK2AP1O14519 115 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 KCNK2O95069 426 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 NADKO95544 446 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-230ENST00000491028 BCHEP06276 602 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 NR2F1P10589 423 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 NAGAP17050 411 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 ABCD3P28288 659 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 HTR1EP28566 365 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 PCGF2P35227 344 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 KRT20P35900 424 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 TMED10P49755 219 aaKnown RBP17.2■□□□□ 0.34
MCF2L-230ENST00000491028 CRISP3P54108 245 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 MLF1P58340 268 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 CDK6Q00534 326 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 PLCXD2Q0VAA5 305 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 BNIP2Q12982 314 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 SCARB2Q14108 478 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 VEZF1Q14119 521 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 DECR1Q16698 335 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 MEP1AQ16819 746 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.2■□□□□ 0.34
MCF2L-230ENST00000491028 SIRT6Q8N6T7 355 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 BCORP1Q8N888 145 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 KDF1Q8NAX2 398 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-230ENST00000491028 HIPK4Q8NE63 616 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 TMEM19Q96HH6 336 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 CNTNAP3BQ96NU0 1288 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 RASL10BQ96S79 203 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 CNTNAP3Q9BZ76 1288 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 CDCP1Q9H5V8 836 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 PIF1Q9H611 641 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 LIN28AQ9H9Z2 209 aaKnown RBP17.2■□□□□ 0.34
MCF2L-230ENST00000491028 ANGPT4Q9Y264 503 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 CPAMD8Q8IZJ3 1885 aa17.2■□□□□ 0.34
MCF2L-230ENST00000491028 ACACAQ13085 2346 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 EXPH5Q8NEV8 1989 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 PRAMEF27A3QJZ7 478 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 SLC28A2O43868 658 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 STX11O75558 287 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 ITGA10O75578 1167 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 OR2J2O76002 312 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 ME2P23368 584 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 ITPKBP27987 946 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 LCN1P31025 176 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 SOX11P35716 441 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 SYPL1Q16563 259 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 FXNQ16595 210 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 GPAT3Q53EU6 434 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 CRB2Q5IJ48 1285 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 ACER2Q5QJU3 275 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 INTS11Q5TA45 600 aaKnown RBP17.19■□□□□ 0.34
MCF2L-230ENST00000491028 REEP3Q6NUK4 255 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 PGM2L1Q6PCE3 622 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 OPN5Q6U736 354 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 LRRC74BQ6ZQY2 392 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 ULK2Q8IYT8 1036 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 DND1Q8IYX4 353 aaKnown RBP17.19■□□□□ 0.34
MCF2L-230ENST00000491028 FBXW8Q8N3Y1 598 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 RNF148Q8N7C7 305 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 OR4N2Q8NGD1 307 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 NFKBIDQ8NI38 313 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 BBS10Q8TAM1 723 aa17.19■□□□□ 0.34
MCF2L-230ENST00000491028 SLC38A5Q8WUX1 472 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms