RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 PSMA5P28066 241 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 ARHGDIAP52565 204 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 PPIAP62937 165 aaKnown RBP3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 MSLNQ13421 630 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 GPM6BQ13491 265 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 CARTPTQ16568 116 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 HKDC1Q2TB90 917 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 HERC4Q5GLZ8 1057 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 ACER2Q5QJU3 275 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 LCE3CQ5T5A8 94 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 OLFML2AQ68BL7 652 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 TPGS2Q68CL5 300 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 RAET1GQ6H3X3 334 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 PYROXD2Q8N2H3 581 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 ZNF491Q8N8L2 437 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 OR52E1Q8NGJ3 308 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 OR52M1Q8NGK5 317 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 BIRC7Q96CA5 298 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 MRPL38Q96DV4 380 aaKnown RBP3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 RAB3CQ96E17 227 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 GCOM2Q9BZD3 368 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 RAB17Q9H0T7 212 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 PALMDQ9NP74 551 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 TIGARQ9NQ88 270 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 TRPV5Q9NQA5 729 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 RCOR3Q9P2K3 495 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 ATP6V1HQ9UI12 483 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 TRMT6Q9UJA5 497 aaKnown RBP3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 U3KQV3 271 aa3.74□□□□□ -1.81
HMGB1P38-201ENST00000490557 A0A1B0GWJ7 208 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 MACROD2A1Z1Q3 448 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 CYB561D2O14569 222 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 CTAGE5O15320 804 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 CLDN3O15551 220 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 MTX2O75431 263 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 SCGB2A1O75556 95 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 SPAG6O75602 509 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 IDH1O75874 414 aaKnown RBP3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 UCP1P25874 307 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 TNFRSF4P43489 277 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 FNTAP49354 379 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 DHPSP49366 369 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 CNN1P51911 297 aaKnown RBP3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 SSTP61278 116 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 OVGP1Q12889 678 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 BTG3Q14201 252 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 CEBPEQ15744 281 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 PPP1R3AQ16821 1122 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 C17orf58Q2M2W7 97 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 KCTD21Q4G0X4 260 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 FILIP1LQ4L180 1135 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 CMPK2Q5EBM0 449 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 LINC00242Q5T6M2 205 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 PRAMEF7Q5VXH5 474 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 FAM219BQ5XKK7 198 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 ZNF600Q6ZNG1 722 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 ZNF584Q8IVC4 421 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 LRRC43Q8N309 656 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 MLKLQ8NB16 471 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 OR6C4Q8NGE1 309 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 ZNF671Q8TAW3 534 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 AGR3Q8TD06 166 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 ANP32BQ92688 251 aaKnown RBP3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 SLCO4A1Q96BD0 722 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 CAPNS2Q96L46 248 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 TCEANC2Q96MN5 208 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 JPH2Q9BR39 696 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 YY1AP1Q9H869 796 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 ADGRL4Q9HBW9 690 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 CRLF2Q9HC73 371 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 HPS4Q9NQG7 708 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 RAI14Q9P0K7 980 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 IKZF3Q9UKT9 509 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 EMCNQ9ULC0 261 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 TRAF3IP3Q9Y228 551 aa3.73□□□□□ -1.81
HMGB1P38-201ENST00000490557 LINC00854A0A1B0GVQ3 168 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 L7N2F9 121 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 M0QX08 132 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 TLR4O00206 839 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 CXCL11O14625 94 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 NUDT21O43809 227 aaKnown RBP3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 NME2P1O60361 137 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 SYNGR4O95473 234 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 KRT6BP04259 564 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 PCCBP05166 539 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 THRBP10828 461 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 DNAJB1P25685 340 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 KRT6CP48668 564 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 HNRNPFP52597 415 aaKnown RBP3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 VCPP55072 806 aaKnown RBP3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 BNIP1Q12981 228 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 IL24Q13007 206 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 NME3Q13232 169 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 SLC10A1Q14973 349 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 EPC2Q52LR7 807 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 CFAP157Q5JU67 520 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 TAF3Q5VWG9 929 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 OR6B2Q6IFH4 312 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 C1orf186Q6ZWK4 172 aa3.72□□□□□ -1.81
HMGB1P38-201ENST00000490557 TAS2R42Q7RTR8 314 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms