RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 EXO5Q9H790 373 aa16.55■□□□□ 0.24
COL9A3-214ENST00000490398 AKTIPQ9H8T0 292 aa16.55■□□□□ 0.24
COL9A3-214ENST00000490398 SERHLQ9NQF3 203 aa16.55■□□□□ 0.24
COL9A3-214ENST00000490398 SIRT3Q9NTG7 399 aaPredicted RBP16.55■□□□□ 0.24
COL9A3-214ENST00000490398 KLRF1Q9NZS2 232 aa16.55■□□□□ 0.24
COL9A3-214ENST00000490398 SLC6A5Q9Y345 797 aa16.55■□□□□ 0.24
COL9A3-214ENST00000490398 FAM215AQ9Y5M1 114 aa16.55■□□□□ 0.24
COL9A3-214ENST00000490398 ITPR2Q14571 2701 aa16.55■□□□□ 0.24
COL9A3-214ENST00000490398 AKAP9Q99996 3911 aa16.55■□□□□ 0.24
COL9A3-214ENST00000490398 FBN2P35556 2912 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 TEX15Q9BXT5 2789 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 OR14I1A6ND48 311 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 HCN1O60741 890 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 IGKV1D-16P01601 117 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 HPNP05981 417 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 GPC1P35052 558 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 ASMTP46597 345 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 PRKAG1P54619 331 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 GAS1P54826 345 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 MANFP55145 182 aaKnown RBP16.54■□□□□ 0.24
COL9A3-214ENST00000490398 NUP107P57740 925 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 RPP38P78345 283 aaKnown RBP16.54■□□□□ 0.24
COL9A3-214ENST00000490398 ART3Q13508 389 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 CASP8Q14790 479 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 WIPI1Q5MNZ9 446 aaPredicted RBP16.54■□□□□ 0.24
COL9A3-214ENST00000490398 DCST1Q5T197 706 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 HHATQ5VTY9 493 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 OR5M10Q6IEU7 315 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 SLC30A6Q6NXT4 461 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 CROCCP2Q86T23 111 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 YRDCQ86U90 279 aaKnown RBP16.54■□□□□ 0.24
COL9A3-214ENST00000490398 RIMKLAQ8IXN7 391 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 NEIL3Q8TAT5 605 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 PIK3R3Q92569 461 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 OTUB1Q96FW1 271 aaPredicted RBP16.54■□□□□ 0.24
COL9A3-214ENST00000490398 C16orf58Q96GQ5 468 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 LMF2Q9BU23 707 aaKnown RBP16.54■□□□□ 0.24
COL9A3-214ENST00000490398 QPCTLQ9NXS2 382 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 HAO1Q9UJM8 370 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 ACAD8Q9UKU7 415 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 OR10H1Q9Y4A9 318 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 DNAJC13O75165 2243 aa16.54■□□□□ 0.24
COL9A3-214ENST00000490398 BCKDKO14874 412 aa16.53■□□□□ 0.24
COL9A3-214ENST00000490398 SLITRK5O94991 958 aa16.53■□□□□ 0.24
COL9A3-214ENST00000490398 ACP2P11117 423 aa16.53■□□□□ 0.24
COL9A3-214ENST00000490398 MAPK1P28482 360 aa16.53■□□□□ 0.24
COL9A3-214ENST00000490398 HTR1EP28566 365 aa16.53■□□□□ 0.24
COL9A3-214ENST00000490398 MAP3K8P41279 467 aa16.53■□□□□ 0.24
COL9A3-214ENST00000490398 RPL14P50914 215 aaKnown RBP16.53■□□□□ 0.24
COL9A3-214ENST00000490398 SMSP52788 366 aa16.53■□□□□ 0.24
COL9A3-214ENST00000490398 DIO3P55073 304 aa16.53■□□□□ 0.24
COL9A3-214ENST00000490398 EMX2Q04743 252 aa16.53■□□□□ 0.24
COL9A3-214ENST00000490398 PMPCAQ10713 525 aa16.53■□□□□ 0.24
COL9A3-214ENST00000490398 GALNT10Q86SR1 603 aa16.53■□□□□ 0.24
COL9A3-214ENST00000490398 CCDC71Q8IV32 467 aaPredicted RBP16.53■□□□□ 0.24
COL9A3-214ENST00000490398 NUP43Q8NFH3 380 aa16.53■□□□□ 0.24
COL9A3-214ENST00000490398 OR1J4Q8NGS1 313 aa16.53■□□□□ 0.24
COL9A3-214ENST00000490398 HOXB13Q92826 284 aaPredicted RBP16.53■□□□□ 0.24
COL9A3-214ENST00000490398 SDCCAG3Q96C92 435 aa16.53■□□□□ 0.24
COL9A3-214ENST00000490398 MTERF3Q96E29 417 aa16.53■□□□□ 0.24
COL9A3-214ENST00000490398 ZBED6CLQ96FA7 236 aaPredicted RBP16.53■□□□□ 0.24
COL9A3-214ENST00000490398 NUF2Q9BZD4 464 aa16.53■□□□□ 0.24
COL9A3-214ENST00000490398 ACSS1Q9NUB1 689 aaPredicted RBP16.53■□□□□ 0.24
COL9A3-214ENST00000490398 ALKBH4Q9NXW9 302 aa16.53■□□□□ 0.24
COL9A3-214ENST00000490398 B4GALT7Q9UBV7 327 aa16.53■□□□□ 0.24
COL9A3-214ENST00000490398 FBXL2Q9UKC9 423 aa16.53■□□□□ 0.24
COL9A3-214ENST00000490398 CBLCQ9ULV8 474 aa16.53■□□□□ 0.24
COL9A3-214ENST00000490398 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.53■□□□□ 0.24
COL9A3-214ENST00000490398 C15orf38-AP3S2A0A0A6YYH1 394 aa16.52■□□□□ 0.24
COL9A3-214ENST00000490398 GLI4P10075 376 aa16.52■□□□□ 0.24
COL9A3-214ENST00000490398 PRPS2P11908 318 aa16.52■□□□□ 0.24
COL9A3-214ENST00000490398 GRK2P25098 689 aa16.52■□□□□ 0.24
COL9A3-214ENST00000490398 ACVR2AP27037 513 aa16.52■□□□□ 0.24
COL9A3-214ENST00000490398 IL12BP29460 328 aa16.52■□□□□ 0.24
COL9A3-214ENST00000490398 GABRA3P34903 492 aa16.52■□□□□ 0.24
COL9A3-214ENST00000490398 HPCAL1P37235 193 aa16.52■□□□□ 0.24
COL9A3-214ENST00000490398 PNLIPRP2P54317 469 aa16.52■□□□□ 0.24
COL9A3-214ENST00000490398 WNT3P56703 355 aa16.52■□□□□ 0.24
COL9A3-214ENST00000490398 CRYZQ08257 329 aaKnown RBP16.52■□□□□ 0.24
COL9A3-214ENST00000490398 TOMM20Q15388 145 aa16.52■□□□□ 0.24
COL9A3-214ENST00000490398 XKRXQ6PP77 449 aa16.52■□□□□ 0.24
COL9A3-214ENST00000490398 FAM83FQ8NEG4 500 aaPredicted RBP16.52■□□□□ 0.24
COL9A3-214ENST00000490398 SARAFQ96BY9 339 aa16.52■□□□□ 0.24
COL9A3-214ENST00000490398 COQ8BQ96D53 544 aa16.52■□□□□ 0.24
COL9A3-214ENST00000490398 TMCO6Q96DC7 493 aa16.52■□□□□ 0.24
COL9A3-214ENST00000490398 FAM120BQ96EK7 910 aaKnown RBP16.52■□□□□ 0.24
COL9A3-214ENST00000490398 YIPF4Q9BSR8 244 aa16.52■□□□□ 0.24
COL9A3-214ENST00000490398 CXorf36Q9H7Y0 433 aa16.52■□□□□ 0.24
COL9A3-214ENST00000490398 NTMQ9P121 344 aa16.52■□□□□ 0.24
COL9A3-214ENST00000490398 RNF6Q9Y252 685 aa16.52■□□□□ 0.24
COL9A3-214ENST00000490398 KLF2Q9Y5W3 355 aaPredicted RBP16.52■□□□□ 0.24
COL9A3-214ENST00000490398 DCHS2Q6V1P9 2916 aa16.52■□□□□ 0.23
COL9A3-214ENST00000490398 A0A1W2PRB8 838 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 FADS1O60427 444 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 SNNO75324 88 aaPredicted RBP16.51■□□□□ 0.23
COL9A3-214ENST00000490398 NKX2-2O95096 273 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 CLDN14O95500 239 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 IFI6P09912 130 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 AGAP20933 346 aa16.51■□□□□ 0.23
COL9A3-214ENST00000490398 KRT20P35900 424 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms