RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 NGBQ9NPG2 151 aa2.97□□□□□ -1.93
CD46-216ENST00000490278 TRPV5Q9NQA5 729 aa2.97□□□□□ -1.93
CD46-216ENST00000490278 DUS2Q9NX74 493 aaKnown RBP2.97□□□□□ -1.93
CD46-216ENST00000490278 ABCD2Q9UBJ2 740 aa2.97□□□□□ -1.93
CD46-216ENST00000490278 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.97□□□□□ -1.93
CD46-216ENST00000490278 GRIN2DO15399 1336 aa2.96□□□□□ -1.93
CD46-216ENST00000490278 ABCC4O15439 1325 aa2.96□□□□□ -1.93
CD46-216ENST00000490278 G3V3Y1 287 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 H0YL77 283 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 PDXKO00764 312 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 CT45A10P0DMU9 189 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 RRASP10301 218 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 LAMP1P11279 417 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 TSPAN8P19075 237 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 FUT1P19526 365 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 CCND2P30279 289 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 CHRNA3P32297 505 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 OR1D4P47884 311 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 HTR5AP47898 357 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 CEBPEQ15744 281 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 LGSNQ5TDP6 509 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 MARC1Q5VT66 337 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 PNCKQ6P2M8 343 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 HACD2Q6Y1H2 254 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 SYVN1Q86TM6 617 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 UNC5CLQ8IV45 518 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 BCORP1Q8N888 145 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 GTSF1Q8WW33 167 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 ART4Q93070 314 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 MCHR2Q969V1 340 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 PINX1Q96BK5 328 aaKnown RBP2.96□□□□□ -1.94
CD46-216ENST00000490278 PPP1R16AQ96I34 528 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 RPAP3Q9H6T3 665 aaPredicted RBP2.96□□□□□ -1.94
CD46-216ENST00000490278 KAT8Q9H7Z6 458 aaKnown RBP2.96□□□□□ -1.94
CD46-216ENST00000490278 YAE1D1Q9NRH1 226 aa2.96□□□□□ -1.94
CD46-216ENST00000490278 BARX2Q9UMQ3 279 aaPredicted RBP2.96□□□□□ -1.94
CD46-216ENST00000490278 EXOSC1Q9Y3B2 195 aaKnown RBP2.96□□□□□ -1.94
CD46-216ENST00000490278 MTF2Q9Y483 593 aaPredicted RBP2.96□□□□□ -1.94
CD46-216ENST00000490278 NOTCH3Q9UM47 2321 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 FAM230AA0A1W2PPH8 454 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 RNF222A6NCQ9 220 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 ANKRD30BLA7E2S9 258 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 A8MX80 341 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 GPAA1O43292 621 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 TSC22D2O75157 780 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 TOM1L1O75674 476 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 ANXA4P09525 319 aaPredicted RBP2.95□□□□□ -1.94
CD46-216ENST00000490278 ALPIP09923 528 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 H2AFZP0C0S5 128 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 SDC1P18827 310 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 IDSP22304 550 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 ALDH3B2P48448 385 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 SLC25A1P53007 311 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 KRTAP10-5P60370 271 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 RPS6P62753 249 aaKnown RBP2.95□□□□□ -1.94
CD46-216ENST00000490278 INAQ16352 499 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 CCDC92Q53HC0 331 aaPredicted RBP2.95□□□□□ -1.94
CD46-216ENST00000490278 CYBRD1Q53TN4 286 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 OLFML2AQ68BL7 652 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 CGB2Q6NT52 195 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 ZCCHC12Q6PEW1 402 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 BTNL3Q6UXE8 466 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 ISLR2Q6UXK2 745 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 C2orf66Q6UXQ4 117 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 Q7L0L9 218 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 SPAG16Q8N0X2 631 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 CD177Q8N6Q3 437 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 Q8N9G6 341 aaPredicted RBP2.95□□□□□ -1.94
CD46-216ENST00000490278 NFAM1Q8NET5 270 aaPredicted RBP2.95□□□□□ -1.94
CD46-216ENST00000490278 ANKRD20A12PQ8NF67 263 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 OR52B4Q8NGK2 314 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 MRAPQ8TCY5 172 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 GIPC3Q8TF64 312 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 ADIPOR1Q96A54 375 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 TADA1Q96BN2 335 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 SIGLEC12Q96PQ1 595 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 CCT8L2Q96SF2 557 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 HCAR1Q9BXC0 346 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 ACTR8Q9H981 624 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 VAT1LQ9HCJ6 419 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 EXOSC3Q9NQT5 275 aaKnown RBP2.95□□□□□ -1.94
CD46-216ENST00000490278 ACTR3BQ9P1U1 418 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 MGAT4BQ9UQ53 548 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 RALGAPA1Q6GYQ0 2036 aa2.95□□□□□ -1.94
CD46-216ENST00000490278 NCAPD2Q15021 1401 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 IGLV3-10A0A075B6K4 115 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 SLC17A2O00624 439 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 TM9SF1O15321 606 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 RAMP1O60894 148 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 SLC2A10O95528 541 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 IGFBP1P08833 259 aaPredicted RBP2.94□□□□□ -1.94
CD46-216ENST00000490278 GSTT2P0CG29 244 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 GSTT2BP0CG30 244 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 FASP25445 335 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 EMDP50402 254 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 MTTPP55157 894 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 BPIFB3P59826 476 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 CXCL6P80162 114 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 IL18R1Q13478 541 aa2.94□□□□□ -1.94
CD46-216ENST00000490278 EXOSC2Q13868 293 aaKnown RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms